CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.316.247.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.316.247.1
T140146_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.316.247.1
C2H2 ZF
30
52
YMCGECGYRTAQTSSLYRHMRTH
gw.316.247.1
C2H2 ZF
58
80
YKCDQCDYSAAQKSNLDSHLATH
gw.316.247.1
C2H2 ZF
86
108
YMCGECGHRTAKKSHIADHMRTH
gw.316.247.1
C2H2 ZF
114
136
YKCDQCDYSAAKKYHLKQHLAKH
gw.316.247.1
C2H2 ZF
142
164
YMCGECGYRTAWKSDLSIHLRTH
gw.316.247.1
C2H2 ZF
170
192
YKCDQCDYSAAQKSSLDLHLAKH
gw.316.247.1
C2H2 ZF
198
220
YMCGECGYRTAKRSHLAIHMRTH
gw.316.247.1
C2H2 ZF
226
248
FKCDQCDYSTAYKPNLDRHLSKH
gw.316.247.1
C2H2 ZF
254
276
YMCGECGYRAAEKSALVKHMRTH
gw.316.247.1
C2H2 ZF
310
332
YICGECGYRTAKKSYLSRHMRSH
gw.316.247.1
C2H2 ZF
338
360
YKCDQCDYSAAEKSTLSNHMRTH
gw.316.247.1
C2H2 ZF
366
388
YKCDQCDYSASRKSSLDLHLAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found