CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.3.385.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.3.385.1
T140156_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.3.385.1
C2H2 ZF
7
29
FKCDQCDYSALLKYTLKRHLAKH
gw.3.385.1
C2H2 ZF
61
83
YKCDQCNYASATKGNLDLHRTKH
gw.3.385.1
C2H2 ZF
92
111
GECGYRTALRSRLTRHMRTH
gw.3.385.1
C2H2 ZF
117
139
YNCDRCDYSAAQESTLNQHMTRH
gw.3.385.1
C2H2 ZF
145
167
FMCGECGYRTALRSSMTVHMRTH
gw.3.385.1
C2H2 ZF
173
195
YKCDQCDFSAIKIDNLDRHMTIH
gw.3.385.1
C2H2 ZF
201
223
YTCEECGYRAAKRVSLIAHMKTH
gw.3.385.1
C2H2 ZF
229
253
YKCDQCDYSEYNYKKDNLDRHMTTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found