CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.360.80.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.360.80.1
T140162_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.360.80.1
C2H2 ZF
4
26
YRCEECNKQFRELGALKKHMRTH
gw.360.80.1
C2H2 ZF
32
54
YRCEECSRQFGRQDSLKRHVRTH
gw.360.80.1
C2H2 ZF
60
82
YRCEECSRQFSRMSHLEEHMRTH
gw.360.80.1
C2H2 ZF
88
110
YRCEECSRQFSRLATLKSHIRTH
gw.360.80.1
C2H2 ZF
116
138
YKCEECSRQFSEWRDLKRHMRTH
gw.360.80.1
C2H2 ZF
144
166
YKCEECTKQFSQLGNLKAHMRTH
gw.360.80.1
C2H2 ZF
172
194
QRCEECSRQFSQLSDLKKHMRTH
gw.360.80.1
C2H2 ZF
200
222
YRCEECTRQFTRLDSLKKHMETH
gw.360.80.1
C2H2 ZF
229
251
YRCEECNKQFSRMGNLKAHMRTH
gw.360.80.1
C2H2 ZF
257
279
YKCEECSRQFSLLSILKTHIHTH
gw.360.80.1
C2H2 ZF
285
307
YRCEECSKQFSQQIALKSHMRTH
gw.360.80.1
C2H2 ZF
313
335
YRCEECSKQFSQLGELKTHARTH
gw.360.80.1
C2H2 ZF
341
363
YKCEECSRQFGRLDHLKNHMRTH
gw.360.80.1
C2H2 ZF
369
391
YRCEECSRQFSRLGHLKTHMRTH
gw.360.80.1
C2H2 ZF
397
419
YKCEECSRQFSQLGDLNKHIWTH
gw.360.80.1
C2H2 ZF
425
447
YRCEECSKQFSRLDHLKEHMRTH
gw.360.80.1
C2H2 ZF
453
475
YKCEECNSQFSQLGNLKIHMRTH
gw.360.80.1
C2H2 ZF
481
503
YRCEKCSKQFSVLGHLKSHMRTH
gw.360.80.1
C2H2 ZF
509
531
YKCEECSRQFSELGHLKKHIRTH
gw.360.80.1
C2H2 ZF
537
559
YKCEECSLQFSQSGVMRRHMRTH
gw.360.80.1
C2H2 ZF
565
587
YRCEECSRQFSQLGNLKKHMQTH
gw.360.80.1
C2H2 ZF
597
619
YRCEECSKQCCKLGNLKTHMRPH
gw.360.80.1
C2H2 ZF
625
647
YRCEECSKQFSKLGNLKTHMRSH
gw.360.80.1
C2H2 ZF
653
675
YSCGECSRQSSELGSLKIHMRTH
gw.360.80.1
C2H2 ZF
681
703
YKCEECSRQFSHLSSLKGHIRTH
gw.360.80.1
C2H2 ZF
709
731
YTCEECSRHFSQLGHLKTHMRTH
gw.360.80.1
C2H2 ZF
737
759
YKCEECNCQFSQLENLMIHMRTH
gw.360.80.1
C2H2 ZF
765
787
YRCEKCSKQFSVLGHLKSHMRTH
gw.360.80.1
C2H2 ZF
793
815
YKCEECSRQFSELGDLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found