CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

gw.39.291.1 *(Branchiostoma floridae)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	gw.39.291.1	T140171_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
gw.39.291.1	C2H2 ZF	1	23	YRCEECSRQFSQLSNLKRHMRTH
gw.39.291.1	C2H2 ZF	29	51	YKCEECSSQFSQLGHLKSHMRTH
gw.39.291.1	C2H2 ZF	57	79	YKCEECSRQFNELGSLNRHMRTH
gw.39.291.1	C2H2 ZF	85	102	YRCEECSRRFSQLGNLKE
gw.39.291.1	C2H2 ZF	113	135	YKCEECSKKFSWLGNLNEHKLTH
gw.39.291.1	C2H2 ZF	141	163	YRCEECSRQFSQLSNLKRHMRTH
gw.39.291.1	C2H2 ZF	169	191	YKCEECSKQFSQLSDLKTHMRTH
gw.39.291.1	C2H2 ZF	197	213	YRCEECSRQFSQLSNMK
gw.39.291.1	C2H2 ZF	224	246	YRCEECSRKFSKLSDLKRHIRTH
gw.39.291.1	C2H2 ZF	252	274	YRCEECSRQFSQLGHLKAHMRTH
gw.39.291.1	C2H2 ZF	280	302	YRCEECSKQFSRQNTLKSHMQTH
gw.39.291.1	C2H2 ZF	308	330	YKCEKCSKQFGILCHLKRHMRAH
gw.39.291.1	C2H2 ZF	336	358	YRCEECSRQFSTPHHLRGHRRTH
gw.39.291.1	C2H2 ZF	364	386	YKCEECSRQFSTLYNLQRHMQTH
gw.39.291.1	C2H2 ZF	392	414	YQCGNCGRQFSELCNLKNHIYTH
gw.39.291.1	C2H2 ZF	420	442	YRCEECSRQFSVLGNLKKHIKTH
gw.39.291.1	C2H2 ZF	448	470	YRCEECSKQFSEIGSLKRHMRTH
gw.39.291.1	C2H2 ZF	476	498	YRCEECSRQFSQLGDLKRHMRTH
gw.39.291.1	C2H2 ZF	504	526	YKCEECSRQFRRLDHLKQHVRSH

Links
Other C2H2 ZF family TFs
Other *Branchiostoma floridae* TFs

0 Related TFs

">No related TF found