CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.428.52.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.428.52.1
T140181_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.428.52.1
C2H2 ZF
45
67
YMCDGCGYKTANKTKLSRHMKMH
gw.428.52.1
C2H2 ZF
73
95
YKCNQCDYSAVWKQSLELHMIKH
gw.428.52.1
C2H2 ZF
101
123
YTCGECGIKTVSRNSLSRHMKIH
gw.428.52.1
C2H2 ZF
129
151
FKCHECDFCTVWKQSLDVHMAKH
gw.428.52.1
C2H2 ZF
157
179
YMCEECGHTTAHKSRLSRHMKIH
gw.428.52.1
C2H2 ZF
185
207
YTCDQCEYSANQKIHIDRHKAKH
gw.428.52.1
C2H2 ZF
213
235
YTCEKCGYKAVDKFGLSTHMKVH
gw.428.52.1
C2H2 ZF
273
295
YKCDLCDYRTAWKSNIDIHMAKH
gw.428.52.1
C2H2 ZF
301
323
YSCDQCEYRSGYRSGLRSHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found