CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.43.1.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.43.1.1
T140185_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.43.1.1
C2H2 ZF
11
33
YKCDQCDYSAARKYHLDRHRAKH
gw.43.1.1
C2H2 ZF
39
61
FKCDQCDYSAAQKSSLDKHLAKH
gw.43.1.1
C2H2 ZF
67
89
YICDECGYKTAEKSNLSSHVRLH
gw.43.1.1
C2H2 ZF
95
118
YKCDQCDYSAAQKVSLKYHHLAKH
gw.43.1.1
C2H2 ZF
124
146
YVCDECGYKTVVKSNLSRHVRIH
gw.43.1.1
C2H2 ZF
181
203
YVCDECGYKTVVKSNLSQHVRIH
gw.43.1.1
C2H2 ZF
209
231
YKCDQCDYSAAQKCSLDQHLAKH
gw.43.1.1
C2H2 ZF
237
259
YVCDECGYKTVVKSNLSRHVRIH
gw.43.1.1
C2H2 ZF
294
316
YICDECGYKTAQKSNLSSHVRIH
gw.43.1.1
C2H2 ZF
351
373
YICDECGYRTACISTLARHMRTH
gw.43.1.1
C2H2 ZF
408
430
YVCDECGYKTALKSYLSQHVQIH
gw.43.1.1
C2H2 ZF
436
458
YICEECGYRAARKSTLDRHHAKH
gw.43.1.1
C2H2 ZF
464
486
YKCDQCDYSAAQKSHLDQHLAKH
gw.43.1.1
C2H2 ZF
492
514
YICDECGYKTAQKSNLSSHVRIH
gw.43.1.1
C2H2 ZF
549
571
YICDECGYRAALISTLARHMRTH
gw.43.1.1
C2H2 ZF
577
600
YKCDQCDYSAAQKSSLDVHHLAKH
gw.43.1.1
C2H2 ZF
606
628
FVCDKCEYKTAQRSNLTQHMKTH
gw.43.1.1
C2H2 ZF
634
656
YKCNQCDYSAAQKSSLDQHVAKH
gw.43.1.1
C2H2 ZF
662
684
FVCDECGYKTALKLNLSRHVRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found