CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.43.7.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.43.7.1
T140186_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.43.7.1
C2H2 ZF
8
30
FICGECGYRTAKKTDLSIHMRTH
gw.43.7.1
C2H2 ZF
36
58
YKCDLCDYAATRKFHLEIHRRKH
gw.43.7.1
C2H2 ZF
64
86
YMCGKCGYKTSDKSDLSRHIRTH
gw.43.7.1
C2H2 ZF
92
114
YKCDQCDYSAAQKSNLDIHRVTH
gw.43.7.1
C2H2 ZF
120
142
YMCGECGYRTAHKYVLFKHMRTH
gw.43.7.1
C2H2 ZF
148
174
YKCDQCDFACGYRTAHKYTLSIHMRTH
gw.43.7.1
C2H2 ZF
180
202
FKCDLCDYSAAQKSKLDVHRSKH
gw.43.7.1
C2H2 ZF
208
230
YKCGECGYRTAHKYALAQHMRTH
gw.43.7.1
C2H2 ZF
236
258
YKCDQCDYAATRKFYLESHQIKH
gw.43.7.1
C2H2 ZF
264
286
YMCGECGYRTAHKYALTQHMRTH
gw.43.7.1
C2H2 ZF
298
320
FKCDKCDYSAAWKSALNSHRLKH
gw.43.7.1
C2H2 ZF
326
348
YMCGECGYRTAHKIVLDRHMRTH
gw.43.7.1
C2H2 ZF
354
376
FKCDQCDYSTAQKSNLDCHRMRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found