CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.551.33.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.551.33.1
T140211_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.551.33.1
C2H2 ZF
9
31
YKCDQCDYSAAVKSNLDQHLTKH
gw.551.33.1
C2H2 ZF
37
59
YMCGECGYRANRKSNLSQHMKTH
gw.551.33.1
C2H2 ZF
65
87
YMCEKCGYRTAHKFYLSQHVRTH
gw.551.33.1
C2H2 ZF
93
115
YKCDQCDYSAATKSAWNYHVAKH
gw.551.33.1
C2H2 ZF
120
142
YICDECGYRTAHKSHLAEHIRTH
gw.551.33.1
C2H2 ZF
148
170
YMCGECRYRTVFKSNLSRHMKTH
gw.551.33.1
C2H2 ZF
176
198
YMCEECGYRTARKTSLSQHIRAH
gw.551.33.1
C2H2 ZF
204
226
YKCGQCDYSAATKFLLDSHLKTH
gw.551.33.1
C2H2 ZF
232
255
YICDECGYRTAHKHHLSRHIRTRH
gw.551.33.1
C2H2 ZF
261
283
YKCDQCDYSAAEKAAFDKHLTKH
gw.551.33.1
C2H2 ZF
286
308
HVCRECGYRTTERSNLSRHMETH
gw.551.33.1
C2H2 ZF
350
372
YMCGECGYRAARKFTLSQHMKTH
gw.551.33.1
C2H2 ZF
378
400
YICDDCGYRTVSKPDLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found