CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gw.55.42.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.55.42.1
T140213_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.55.42.1
C2H2 ZF
8
30
YVCTDCGYRTAYRSHLSRHLRKH
gw.55.42.1
C2H2 ZF
36
59
YKCDRCDYSATQKCNIDRHIMVKH
gw.55.42.1
C2H2 ZF
65
87
YICVECGYSTANKSNLTQHMIKH
gw.55.42.1
C2H2 ZF
93
115
YMCIECDSGAVSKSHLSVHMRKH
gw.55.42.1
C2H2 ZF
121
144
YKCHLCEYTAAQKGHIDQHVMIKH
gw.55.42.1
C2H2 ZF
150
172
YMCKECIYKTAKKADLSRHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found