CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.63.10.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.63.10.1
T140224_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.63.10.1
C2H2 ZF
3
24
YKCGTCESEFSLPRDLHNHVKQ
gw.63.10.1
C2H2 ZF
31
54
INCQDCGQSFTSLATVRVHQQQKH
gw.63.10.1
C2H2 ZF
57
78
LTCQHCGKECANAGTLSMHAKV
gw.63.10.1
C2H2 ZF
169
192
MSCQQCGESFESFASLRLHEYHRH
gw.63.10.1
C2H2 ZF
195
218
VECKLCRETFVTVHSLGKHMKKVH
gw.63.10.1
C2H2 ZF
232
253
CQYCDISFAEKKSFTKHMKVYH
gw.63.10.1
C2H2 ZF
258
277
HICNLCDAPFTSMKSMLKHG
gw.63.10.1
C2H2 ZF
285
307
FVCDICSSFFGTTESLANHLSSH
gw.63.10.1
C2H2 ZF
341
364
SECDICGKYFAGQNLMKRHKEQVH
gw.63.10.1
C2H2 ZF
370
392
FKCDVCSKDFKRKAELVIHMSVH
gw.63.10.1
C2H2 ZF
398
420
HLCMYCGKSFKIQASLKQHISIH
gw.63.10.1
C2H2 ZF
426
448
HVCHLCGRAFNQKINLRKHLESH
gw.63.10.1
C2H2 ZF
454
477
FQCEACGKTFQHSDTLRLHMRRTH
gw.63.10.1
C2H2 ZF
483
505
SCRYCGKKFLRSAVLQIHEDAVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found