CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.7.676.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.7.676.1
T140251_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.7.676.1
C2H2 ZF
1
14
FSRLGHLKTHMRTH
gw.7.676.1
C2H2 ZF
20
42
YKCEECSRQFSRLGDLKRHMRTH
gw.7.676.1
C2H2 ZF
48
70
YNCEECNKQFGKLGHLKAHMRTH
gw.7.676.1
C2H2 ZF
76
98
YRCEECSRQFIQLGNLKRHMRTH
gw.7.676.1
C2H2 ZF
104
126
YDCEECSKQFSQLGALKRHIRTH
gw.7.676.1
C2H2 ZF
132
154
YRCEECSKQFSHLDSLKTHMRTH
gw.7.676.1
C2H2 ZF
160
182
YKCEECSREFSNLSNLNKHIRTH
gw.7.676.1
C2H2 ZF
188
210
YKCGECSTQFSQLSNLKSHMRTH
gw.7.676.1
C2H2 ZF
216
238
YTCEECNKQFNQLSDLKKHMRTH
gw.7.676.1
C2H2 ZF
244
266
YRCEECNSQFSQLSDLERHMRTH
gw.7.676.1
C2H2 ZF
272
294
YQCDECSRQFCELGSLKKHMQTH
gw.7.676.1
C2H2 ZF
300
322
FRCEECSRQFSELGALKTHMRTH
gw.7.676.1
C2H2 ZF
328
350
YKCKECSRQFSELGNLKKHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found