CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.80.22.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.80.22.1
T140253_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.80.22.1
C2H2 ZF
1
21
CTECDKTFNSVSKLKSHTRVH
gw.80.22.1
C2H2 ZF
27
49
FGCKHCPAKFVYENQLKLHSKIH
gw.80.22.1
C2H2 ZF
55
77
YACAKCPAKFTLAWSLKLHEKTH
gw.80.22.1
C2H2 ZF
83
105
FPCSECSAKFDSAGSLKEHEQSH
gw.80.22.1
C2H2 ZF
109
130
YACMQCTAKFSTARDLWEHENT
gw.80.22.1
C2H2 ZF
137
159
HTCLQCNATFPSNSKLNRHMTVH
gw.80.22.1
C2H2 ZF
165
187
YHCSQCSAGFSTKKGLEKHMKRH
gw.80.22.1
C2H2 ZF
221
243
YSCSICSEEFLHPYDLKVHWASH
gw.80.22.1
C2H2 ZF
249
271
YSCDKCPASFKRVGHLRRHQKAH
gw.80.22.1
C2H2 ZF
277
300
YCCPYCSVKYDRLAHLRMHMRAYH
gw.80.22.1
C2H2 ZF
309
331
FVCPECPANYIRADHLKSHLKVH
gw.80.22.1
C2H2 ZF
340
362
YRCQHCTASFLTPSHLTNHMKLH
gw.80.22.1
C2H2 ZF
375
397
HLCSQCPAGFKDARGLSEHLKIH
gw.80.22.1
C2H2 ZF
403
423
VCPECPARFNRPDHLRNHMLI
gw.80.22.1
C2H2 ZF
430
452
YTCQKCSRKFLSSQQLEYHMVWH
gw.80.22.1
C2H2 ZF
458
480
HECSLCSQNFPTAQSLKEHRKTH
gw.80.22.1
C2H2 ZF
486
507
FRCPMCPADFEYKSNLKRHKTS
gw.80.22.1
C2H2 ZF
514
536
YACSACSKEFDRFKDLRKHRKTH
gw.80.22.1
C2H2 ZF
549
571
QRCEECNATFSELRCLERHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found