CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.804.1.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.804.1.1
T140255_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.804.1.1
C2H2 ZF
3
25
YKCDRCDFSAAWKSSFDRHIATH
gw.804.1.1
C2H2 ZF
31
53
YMCGECGYRTVLMSTLSRHMRIH
gw.804.1.1
C2H2 ZF
59
82
YKCDQCDYSATQKPSLDKHIAENH
gw.804.1.1
C2H2 ZF
88
111
YKCDQCDFSAMQKSHIDYHIATKH
gw.804.1.1
C2H2 ZF
117
139
YMCGECGYRTVLKYTLSTHMKIH
gw.804.1.1
C2H2 ZF
174
196
YMCSECGYRTVQKSKLSRHMKTH
gw.804.1.1
C2H2 ZF
202
224
YKCDLCDYSAARKFNLDKHLAKH
gw.804.1.1
C2H2 ZF
230
252
YMCGECGYRTAHKAHLAKHMRTH
gw.804.1.1
C2H2 ZF
294
316
YMCGECGYRTVQKSKLSRHMRTH
gw.804.1.1
C2H2 ZF
351
373
YMCVECGYRPAQRSSLSRHMRTH
gw.804.1.1
C2H2 ZF
379
401
YKCEQCDYSAAQKTTLNEHRTKH
gw.804.1.1
C2H2 ZF
442
464
YMCEECGYRASLRFHLSQHMRTH
gw.804.1.1
C2H2 ZF
470
493
FKCDQCDFSAARKSTLVRHVAAGH
gw.804.1.1
C2H2 ZF
499
521
FMCGECGYRTARKSSLYIHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found