CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22000393m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22000393m.g
T140346_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22000393m.p
C2H2 ZF
17
39
FFCKWCSRRFSRKNNLVSHMRTH
Ocbimv22000393m.p
C2H2 ZF
57
80
YCCQKCNKSFSSVDLLNSHKVSQH
Ocbimv22000393m.p
C2H2 ZF
89
111
HECNICGKVFVSGVMLTIHVRMH
Ocbimv22000393m.p
C2H2 ZF
117
139
YGCMFCEKRFATSSDLNRHTRIH
Ocbimv22000393m.p
C2H2 ZF
145
167
FQCRFCGKRFTQNSNLKVHLRTH
Ocbimv22000393m.p
C2H2 ZF
173
196
HHCMQCSIGFTTRAALTQHIRVHH
Ocbimv22000393m.p
C2H2 ZF
783
805
YACMLCSKTFQQANHLTYHIRTH
Ocbimv22000393m.p
C2H2 ZF
811
833
YKCVYCGKAFAKPSDLNRHTRIH
Ocbimv22000393m.p
C2H2 ZF
839
861
FKCEFCAKRFTQNSNLVSHLRTH
Ocbimv22000393m.p
C2H2 ZF
868
890
YRCSHCNKSFSDFPLLSKHLACH
Ocbimv22000393m.p
C2H2 ZF
895
918
YKCKLCLRTFSSIHLLSKHTAHAH
Ocbimv22000393m.p
C2H2 ZF
932
956
RCHICNTCGKEFLTSSDLKRHTRIH
Ocbimv22000393m.p
C2H2 ZF
962
984
FACDYCEKRFNQSSNLISHVKTH
Ocbimv22000393m.p
C2H2 ZF
990
1012
HKCDFCPREFFSTAMLYRHRRLH
Ocbimv22000393m.p
C2H2 ZF
1018
1040
YKCNICQMCFSRANFLKYHMATH
Ocbimv22000393m.p
C2H2 ZF
1174
1196
FQCPFCMKSFDHSSLLINHIMTH
Ocbimv22000393m.p
C2H2 ZF
1202
1224
YSCKVCSKSFFTRSALRQHSSRH
Ocbimv22000393m.p
C2H2 ZF
1230
1252
FRCGYCSRRFYLNVFLLLHLKKH
Ocbimv22000393m.p
C2H2 ZF
1560
1582
HQCEICGRTFVQACHLTYHIRTH
Ocbimv22000393m.p
C2H2 ZF
1588
1610
YGCRHCGKAFFTSSDLKRHTRVH
Ocbimv22000393m.p
C2H2 ZF
1616
1638
FKCNHCRKRFTQRSNLLIHTRSH
Ocbimv22000393m.p
C2H2 ZF
1644
1666
YRCRLCPKKFSTSSMLARHQQTH
Ocbimv22000393m.p
C2H2 ZF
1677
1700
FCCPACQQKFTNYYSLTNHLKASH
Ocbimv22000393m.p
C2H2 ZF
1934
1955
QCEICFRTFSQSSHLRYHLRTH
Ocbimv22000393m.p
C2H2 ZF
1961
1983
YHCDYCDKAFFTSSDRNRHTRVH
Ocbimv22000393m.p
C2H2 ZF
1989
2011
YGCGLCQRTFSQKSNLMGHLKTH
Ocbimv22000393m.p
C2H2 ZF
2152
2174
FQCSLCSRTFPLQKQLASHMRYH
Ocbimv22000393m.p
C2H2 ZF
2180
2202
YPCSICAKSFLKMSDLRRHLRVH
Ocbimv22000393m.p
C2H2 ZF
2208
2230
FVCKWCPRKFSQSSNLTAHLRTH
Ocbimv22000393m.p
C2H2 ZF
2236
2258
FQCGLCNKKFSQSSSLKMHTKMH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found