CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22006992m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22006992m.g
T140622_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22006992m.p
C2H2 ZF
34
56
YQCDFCKKVFAQKCYLTIHKRIH
Ocbimv22006992m.p
C2H2 ZF
62
84
YQCDVCGKSFPRRDNLTIHKRVH
Ocbimv22006992m.p
C2H2 ZF
90
112
YQCDICGKSFSVKGSLINHKRIH
Ocbimv22006992m.p
C2H2 ZF
118
140
YHCDICGKLFSQNGDLTQHKRIH
Ocbimv22006992m.p
C2H2 ZF
146
168
YCCEICGKSFYEKSDVTKHKVIH
Ocbimv22006992m.p
C2H2 ZF
174
196
YHCNICGKAFSASSCLTTHKRIH
Ocbimv22006992m.p
C2H2 ZF
202
224
YHCDICGKSFSRSGNINIHKRVH
Ocbimv22006992m.p
C2H2 ZF
230
252
YRCDICGKSFSVNCQLTNHKRVH
Ocbimv22006992m.p
C2H2 ZF
258
280
YHCDVCGKSFSQHGDLTKHKRIH
Ocbimv22006992m.p
C2H2 ZF
286
308
YQCDICGKSFSQNGDLTKHKRIH
Ocbimv22006992m.p
C2H2 ZF
314
336
YHCDVCSKSFSTIGDLIAHKRTH
Ocbimv22006992m.p
C2H2 ZF
342
364
YHCDVCGKAFCQRGDLNSHKRIH
Ocbimv22006992m.p
C2H2 ZF
370
392
YRCDICGKSFCVTSQLITHKRIH
Ocbimv22006992m.p
C2H2 ZF
398
420
YSCDICGKSFSKNDTLTKHKHTH
Ocbimv22006992m.p
C2H2 ZF
426
448
YHCDICGKSFSFSSNLTVHKHVH
Ocbimv22006992m.p
C2H2 ZF
454
476
YFCDICGNSFSRNDTLTVHKRTH
Ocbimv22006992m.p
C2H2 ZF
482
504
HYCNICGKSFSQRSHLSTHRAVH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found