CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22012577m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22012577m.g	T140891_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22012577m.p	C2H2 ZF	360	382	LFCDYCGKKFAQEYLMHMHRRKH
Ocbimv22012577m.p	C2H2 ZF	388	410	FQCDICNKQFSRKDVMQRHKKNH
Ocbimv22012577m.p	C2H2 ZF	506	528	YYCDICQKQFAQRYYLAIHKRSH
Ocbimv22012577m.p	C2H2 ZF	534	556	FQCDFCIQKFARKDTLKIHRRTH
Ocbimv22012577m.p	C2H2 ZF	562	584	YQCNVCLEKFSQRIKLQIHQKQH
Ocbimv22012577m.p	C2H2 ZF	590	612	YQCDICLRHFAQRYYLRIHRRTH
Ocbimv22012577m.p	C2H2 ZF	619	640	QCEVCLKQFVQKYHLEIHKRIH
Ocbimv22012577m.p	C2H2 ZF	646	668	FQCDVCLKQFTQKYYLAIHKRTH
Ocbimv22012577m.p	C2H2 ZF	674	696	FQCDFCIQKFARKTTLQIHRRTH
Ocbimv22012577m.p	C2H2 ZF	702	724	FKCEVCLKQFSQSSKLRVHQRTH
Ocbimv22012577m.p	C2H2 ZF	730	752	YQCDVCMKLFAQRHYLQIHQRSH
Ocbimv22012577m.p	C2H2 ZF	758	780	FQCEICFKQFAQRNTLQIHKRTH
Ocbimv22012577m.p	C2H2 ZF	786	808	FQCEVCLKNFAHKHYLQLHKRTH
Ocbimv22012577m.p	C2H2 ZF	814	836	FQCDFCFKQFAQRNSLQMHRRTH
Ocbimv22012577m.p	C2H2 ZF	842	864	FQCEVCLKAFAQRHYLRLHKRTH
Ocbimv22012577m.p	C2H2 ZF	870	892	FHCDLCPKHFARSDTLHRHKKTH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found