CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22016313m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22016313m.g	T141061_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22016313m.p	C2H2 ZF	49	71	YTCDVCLLIFSDVGSLTEHKQIH
Ocbimv22016313m.p	C2H2 ZF	77	100	YPCDICGKSFSHKTNLTRHHKHAH
Ocbimv22016313m.p	C2H2 ZF	106	128	CCCDICGKTFMTIETLATHKRTH
Ocbimv22016313m.p	C2H2 ZF	134	156	YHCDVCSESFTKRKTLNVHKRRH
Ocbimv22016313m.p	C2H2 ZF	161	183	HECDVCGKTFSHSAYLTSHKLTH
Ocbimv22016313m.p	C2H2 ZF	189	211	YECDSCSKTFSRKDYLKRHRRVH
Ocbimv22016313m.p	C2H2 ZF	217	239	YECNVCEKSFSGSANLTCHKRKH
Ocbimv22016313m.p	C2H2 ZF	245	267	YECNICGKTFSTVGNLSSHKRIH
Ocbimv22016313m.p	C2H2 ZF	273	295	YECDICHRTFSQSGHLTNHQSVH
Ocbimv22016313m.p	C2H2 ZF	301	323	HRCDVCGKTFSISGDLTRHKHSH
Ocbimv22016313m.p	C2H2 ZF	329	351	FPCDVCDKKFTTSEHLASHKLIH
Ocbimv22016313m.p	C2H2 ZF	356	378	HECDVCGKTFSRKRYLIRHKHIH
Ocbimv22016313m.p	C2H2 ZF	384	406	YHCDICGKSFFMHADLILHKQIH
Ocbimv22016313m.p	C2H2 ZF	412	434	YQCDICNKIFARKRYLVRHRHIH
Ocbimv22016313m.p	C2H2 ZF	478	500	HQCDACGKIFAQKRYLIRHKHIH
Ocbimv22016313m.p	C2H2 ZF	506	528	YHCDTCGKTFSRNDYLTLHKRVH
Ocbimv22016313m.p	C2H2 ZF	534	556	YNCDVCGKAFSTTKILTRHKRIH
Ocbimv22016313m.p	C2H2 ZF	562	583	YQCNMCGKTFTYKTTLNYHHQK

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found