CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22021385m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22021385m.g	T141302_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22021385m.p	C2H2 ZF	16	37	YHCDICKKSFSLKSKLVTHKCI
Ocbimv22021385m.p	C2H2 ZF	47	69	YPCDICGKSFTVKLNLTEHRGTH
Ocbimv22021385m.p	C2H2 ZF	75	97	HNCDICGKSFVARSKLTEHKNIH
Ocbimv22021385m.p	C2H2 ZF	103	125	YKCDICDKSFLRKHNLITHKHLH
Ocbimv22021385m.p	C2H2 ZF	131	153	YKCDTCGKSFSLRGHLTSHGRIH
Ocbimv22021385m.p	C2H2 ZF	159	181	YHCDICGKSFAHTDGLTRHIRVH
Ocbimv22021385m.p	C2H2 ZF	187	209	YKCKMCGDSFSDSGNLTKHKKIH
Ocbimv22021385m.p	C2H2 ZF	215	237	YHCDICGKSFFQKVHLLSHKRIH
Ocbimv22021385m.p	C2H2 ZF	243	265	YQCDICGKSFSNGSSVTTHKRIH
Ocbimv22021385m.p	C2H2 ZF	271	293	YHCDICSKSFSFGSKLTVHKRIH
Ocbimv22021385m.p	C2H2 ZF	299	321	YGCDVCGKSFSNRSAVTSHKRIH
Ocbimv22021385m.p	C2H2 ZF	327	349	YQCDICGKSFPAGSKLTVHKRIH
Ocbimv22021385m.p	C2H2 ZF	355	377	YECETCGRSFPYASGLTVHKRIH
Ocbimv22021385m.p	C2H2 ZF	383	406	YNCETCGKSFTRRSQLMIHKRRIH
Ocbimv22021385m.p	C2H2 ZF	412	434	YPCDVCGKSFTDGSGLNVHKRMH
Ocbimv22021385m.p	C2H2 ZF	440	462	YHCDLCGKSFRYSGAITVHKRIH
Ocbimv22021385m.p	C2H2 ZF	468	491	YDCNFCGKSFSGTSQLTIHKRHIH
Ocbimv22021385m.p	C2H2 ZF	497	519	YHCNICGKSFSAQSPLNYHKRIH
Ocbimv22021385m.p	C2H2 ZF	525	541	YHCDICGKSFGYSSGLT

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found