CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22022020m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22022020m.g
T141376_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22022020m.p
C2H2 ZF
25
47
YDCDICKKSFSLKGNLTKHKRIH
Ocbimv22022020m.p
C2H2 ZF
53
75
YHCDICGKSFSRIDDLTKHKRSH
Ocbimv22022020m.p
C2H2 ZF
81
103
YHCNTCGKTFSVSSGLASHKRTH
Ocbimv22022020m.p
C2H2 ZF
109
131
CQCDICGKSFSQSSHLIIHIRIH
Ocbimv22022020m.p
C2H2 ZF
137
159
YVCDICGKPFSQSSILTIHKRIH
Ocbimv22022020m.p
C2H2 ZF
165
187
YHCDICSKSFSQSFALTKHKYLH
Ocbimv22022020m.p
C2H2 ZF
193
215
FHCDICDKSFSVNSLFTEHKRIH
Ocbimv22022020m.p
C2H2 ZF
221
243
FHCDVCGKSFCQSSVLTKHKRCH
Ocbimv22022020m.p
C2H2 ZF
249
271
YQCDICGKSFSGSSGIVRHKRIH
Ocbimv22022020m.p
C2H2 ZF
277
299
YHCDVCGKSFSVSCHLLEHKRIH
Ocbimv22022020m.p
C2H2 ZF
305
327
FHCNICDKSFSVNSALTKHKRIH
Ocbimv22022020m.p
C2H2 ZF
333
355
YLCDICGKSFSRSSNLNTHVRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found