CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22022431m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22022431m.g	T141406_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22022431m.p	C2H2 ZF	65	87	FHCEDCGKRFTTRSSLSLHKHIH
Ocbimv22022431m.p	C2H2 ZF	93	115	YHCDICGKAFSQSGGLSSHKRIH
Ocbimv22022431m.p	C2H2 ZF	121	143	YHCNICDKTFSQSYGLFSHKRIH
Ocbimv22022431m.p	C2H2 ZF	149	171	YHCYVCGKKFSHSGSLSSHNYIH
Ocbimv22022431m.p	C2H2 ZF	177	199	YHCDICGKRFSQSGTLSYHKRTH
Ocbimv22022431m.p	C2H2 ZF	205	227	YLCDICGQAFSKNVTLSIHKRTH
Ocbimv22022431m.p	C2H2 ZF	233	255	YHCDVCGKTFSDRGSLIYHKPIH
Ocbimv22022431m.p	C2H2 ZF	261	283	YHCDICGKTFSQTSCLSSHKRTH
Ocbimv22022431m.p	C2H2 ZF	289	311	YHCDICGKSFTRNFSLSVHKRIH
Ocbimv22022431m.p	C2H2 ZF	317	340	YQCDICGITFCHRGSLFYHKQTIH
Ocbimv22022431m.p	C2H2 ZF	346	368	HHCNICGKTFSVSACLSSHIRSH
Ocbimv22022431m.p	C2H2 ZF	374	396	YHCDICGKTFSQSCSLSSHKRIH
Ocbimv22022431m.p	C2H2 ZF	402	424	YHCDICGKMFTKNGNLSLHKRIH
Ocbimv22022431m.p	C2H2 ZF	430	452	YHCDICDKRFSYSDNLSVHKHIH
Ocbimv22022431m.p	C2H2 ZF	458	480	YHCDICSKTFTQKAHLSAHKRSH
Ocbimv22022431m.p	C2H2 ZF	486	508	YHCDVCGKTYSRNYNLTIHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found