CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22023346m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22023346m.g	T141453_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22023346m.p	C2H2 ZF	25	47	YNCDVCKRCFSQKSNLAVHKRIH
Ocbimv22023346m.p	C2H2 ZF	71	88	YPCDICGKSFSQSSAITA
Ocbimv22023346m.p	C2H2 ZF	127	149	YYCDICGKSFSTSSPLPAHRRIH
Ocbimv22023346m.p	C2H2 ZF	155	177	YQCDVCSKSFSQNNVLTRHKRIH
Ocbimv22023346m.p	C2H2 ZF	183	205	YHCDICGKSFTQSNDVTKHKRTH
Ocbimv22023346m.p	C2H2 ZF	211	233	FNCDICGKSFCHSSDLIVHKRIH
Ocbimv22023346m.p	C2H2 ZF	239	261	HHCDVCGKSFSLNSNLSAHKRIH
Ocbimv22023346m.p	C2H2 ZF	267	289	YYCDICGKSFSHSSSLTSHRRTH
Ocbimv22023346m.p	C2H2 ZF	295	317	YYCDICGKSFSHNSTLTSHKRIH
Ocbimv22023346m.p	C2H2 ZF	323	344	YHCNICGKSFSNSDLTVHRRIH
Ocbimv22023346m.p	C2H2 ZF	350	372	YHCDICGKLFSDSSDLTKHKRIH
Ocbimv22023346m.p	C2H2 ZF	379	400	HCDICGKSFTDCSNLTAHKRIH
Ocbimv22023346m.p	C2H2 ZF	406	428	YNCDICGKSFSHSSNLSKHKRIH
Ocbimv22023346m.p	C2H2 ZF	434	456	YHCDICGKSFSQSSNLSTHIRIH
Ocbimv22023346m.p	C2H2 ZF	462	484	YHCDICGKSFSDSSALPRHKCIH
Ocbimv22023346m.p	C2H2 ZF	490	512	YHCDICGKSFSDSSALPRHKCIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found