CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22024761m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22024761m.g	T141578_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22024761m.p	C2H2 ZF	34	56	YCCDICKKSFSQNNNLAQHKCTH
Ocbimv22024761m.p	C2H2 ZF	62	84	YHCDICGKSFSRCVRLTEHKSIH
Ocbimv22024761m.p	C2H2 ZF	90	112	FCCNICGYSFSKLDSLAKHKRTH
Ocbimv22024761m.p	C2H2 ZF	118	140	YHCEICGKSFSGKWNLTTHIRIH
Ocbimv22024761m.p	C2H2 ZF	146	168	YHCLVCEKSFSSGSNLTRHQYIH
Ocbimv22024761m.p	C2H2 ZF	174	196	HTCDICGKSFTQENKLARHKYIH
Ocbimv22024761m.p	C2H2 ZF	200	221	KLYDCGISLSTRSALTAHKNIH
Ocbimv22024761m.p	C2H2 ZF	227	249	YCCDICDKSFSSSSNLNKHKRVH
Ocbimv22024761m.p	C2H2 ZF	255	277	YHCDVCGKSFSQSSSLTQHKRRH
Ocbimv22024761m.p	C2H2 ZF	283	305	YHCDICGKSFFKLDSLTIHKRIH
Ocbimv22024761m.p	C2H2 ZF	311	333	YHCHICGKSFSTRSNLTTHKYIH
Ocbimv22024761m.p	C2H2 ZF	339	361	YQCHFCGKSFSDGSTLTRHKYIH
Ocbimv22024761m.p	C2H2 ZF	367	389	YQCDACDKSFSLKISLARHKYIH
Ocbimv22024761m.p	C2H2 ZF	395	417	FHCDICGMSFLDGSTLTGHKRIH
Ocbimv22024761m.p	C2H2 ZF	423	445	YHCDICGKSFSRSSHVTSHKRIH
Ocbimv22024761m.p	C2H2 ZF	451	473	YHCDVCSKSFSHSGSLTSHKRIH
Ocbimv22024761m.p	C2H2 ZF	479	501	YHCDVCGKSFSGSSDLARHKRIH
Ocbimv22024761m.p	C2H2 ZF	507	529	HHCDICGKSFSQKCTLTSHISIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found