CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22025536m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22025536m.g	T141590_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22025536m.p	C2H2 ZF	12	34	YHCDICGKSFSRSSHISAHKRIH
Ocbimv22025536m.p	C2H2 ZF	40	62	YHCDICGKSFSHNCVLIAHKRIH
Ocbimv22025536m.p	C2H2 ZF	68	90	YHCDICGKSFSYSSYLSTHKHIH
Ocbimv22025536m.p	C2H2 ZF	96	118	YHCDICGKSFSSSGYVTAHKRTH
Ocbimv22025536m.p	C2H2 ZF	124	146	YQCNICGKSFSRSNRVTAHKRTH
Ocbimv22025536m.p	C2H2 ZF	152	174	YHCDICGNSFTENAALTKHKRIH
Ocbimv22025536m.p	C2H2 ZF	180	202	YRCDICGKSFSHNCVLIAHKRTH
Ocbimv22025536m.p	C2H2 ZF	208	230	YQCDICGKSFSESGTLTKHNSIH
Ocbimv22025536m.p	C2H2 ZF	236	258	YHCDICGKSFSQNSNLMKHKYIH
Ocbimv22025536m.p	C2H2 ZF	264	286	YHCDICGKSFSQNGDLTTHKHTH
Ocbimv22025536m.p	C2H2 ZF	292	314	YHCDICGKSFSSSSNLSTHKRIH
Ocbimv22025536m.p	C2H2 ZF	320	342	YHCDICSKSFSKYNDLTKHKRIH
Ocbimv22025536m.p	C2H2 ZF	348	370	YHCDICGKSFSLNSILTAHKRIH
Ocbimv22025536m.p	C2H2 ZF	376	398	YHCDVCGKSFSESSKLTRHNSIH
Ocbimv22025536m.p	C2H2 ZF	404	426	HHCDICGKSFSQNSNLMKHKYIH
Ocbimv22025536m.p	C2H2 ZF	432	454	YHCGSCGKSFSNSSNLSRHKHIH
Ocbimv22025536m.p	C2H2 ZF	460	482	YHCDICGKSFSRSSHISAHKRIH
Ocbimv22025536m.p	C2H2 ZF	488	510	YQCDICGNSFSENTALTKHNRTH
Ocbimv22025536m.p	C2H2 ZF	516	538	YHCDICGKSFSQNCDLTKHKHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found