CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22028285m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22028285m.g	T141707_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22028285m.p	C2H2 ZF	11	32	YHCDICGKSFSGSANLAKHKCT
Ocbimv22028285m.p	C2H2 ZF	39	61	YHCDICGKSFSERCNLRTHKRIH
Ocbimv22028285m.p	C2H2 ZF	67	89	YRCDICGRLFSVSSVLTNHRRIH
Ocbimv22028285m.p	C2H2 ZF	95	117	YQCDICGKSFSQRGILTNHKHIH
Ocbimv22028285m.p	C2H2 ZF	123	145	FQCDICSKSFSESRFLTTHKRIH
Ocbimv22028285m.p	C2H2 ZF	151	173	YCCDICGKSFSVRGTLTNHKRIH
Ocbimv22028285m.p	C2H2 ZF	179	201	YSCDICGKPFSEKGTLTKHKRIH
Ocbimv22028285m.p	C2H2 ZF	207	229	YKCDICGKSFSGNSCLTEHKRIH
Ocbimv22028285m.p	C2H2 ZF	235	257	YYCDICGKSFSRNGYLTEHKHIH
Ocbimv22028285m.p	C2H2 ZF	263	285	YRCDICGKSFALKEHLTKHRRIH
Ocbimv22028285m.p	C2H2 ZF	291	313	YCCDICGKSFSRCSDLTKHKRIH
Ocbimv22028285m.p	C2H2 ZF	319	341	YCCDICGKSFSRNSHLNEHKRSH
Ocbimv22028285m.p	C2H2 ZF	347	369	YHCDICGKSFSHGTNIAIHKRIH
Ocbimv22028285m.p	C2H2 ZF	375	397	YHCDICGKSFSQNGELASHKRIH
Ocbimv22028285m.p	C2H2 ZF	403	425	YHCDVCGKSFSQKNQSTTHKRIH
Ocbimv22028285m.p	C2H2 ZF	431	453	YQCDMCGKSFSQRIHLMKHVGIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found