CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22028287m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22028287m.g
T141709_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22028287m.p
C2H2 ZF
31
53
DHCDICGKSFSESCNLITHKYIH
Ocbimv22028287m.p
C2H2 ZF
87
109
YQCDICGKSFSYRNNIAAHKRIH
Ocbimv22028287m.p
C2H2 ZF
115
137
YCCDVCGKSFSRNGQLTRHKQNH
Ocbimv22028287m.p
C2H2 ZF
143
165
YRCDVCGKSFSQSGDLTGHKRSH
Ocbimv22028287m.p
C2H2 ZF
171
193
YQCDICGKSFFQNYKLTTHKRSH
Ocbimv22028287m.p
C2H2 ZF
199
221
YLCDICGRSFTQNGTLTEHKQIH
Ocbimv22028287m.p
C2H2 ZF
227
249
YHCGVCGKSFSVHKVLTNHMRIH
Ocbimv22028287m.p
C2H2 ZF
255
277
YKCDICGKSFSVNSVLTTHKRTH
Ocbimv22028287m.p
C2H2 ZF
283
305
YQCDICAKSFSQSVHLTKHKRIH
Ocbimv22028287m.p
C2H2 ZF
311
333
YCCDICGKSFSQRIHLTRHVAIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found