CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22028602m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22028602m.g
T141721_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22028602m.p
C2H2 ZF
62
84
YHCDVCGKSFPRRDYLKVHKNIH
Ocbimv22028602m.p
C2H2 ZF
90
112
YHCDICGKSFSNSGDLNTHKRIH
Ocbimv22028602m.p
C2H2 ZF
118
140
YHCDVCGKSFSQNGNFNAHKRIH
Ocbimv22028602m.p
C2H2 ZF
146
168
YHCNVCGKSFCKGSNLNNHKRIH
Ocbimv22028602m.p
C2H2 ZF
174
196
YRCDICGKSFSMSCTLNKHKRIH
Ocbimv22028602m.p
C2H2 ZF
202
224
YHCDICGKSFSRSGNFNSHKRIH
Ocbimv22028602m.p
C2H2 ZF
230
252
YYCDSCGKSFSRIGNLNAHKRIH
Ocbimv22028602m.p
C2H2 ZF
258
280
YECSICGKSFTESGNLNAHVRTH
Ocbimv22028602m.p
C2H2 ZF
286
308
FHCDICGKSFSESGSVNTHKRTH
Ocbimv22028602m.p
C2H2 ZF
314
336
HHCDICGKSFSESGNLNTHKRTH
Ocbimv22028602m.p
C2H2 ZF
342
363
YHCDVCGKSFSQITSVNTHKCI
Ocbimv22028602m.p
C2H2 ZF
370
392
YHCDICDKSFFTSGNLNSHKHTH
Ocbimv22028602m.p
C2H2 ZF
398
420
YHCDICGKSYSHSSKVNIHKRTH
Ocbimv22028602m.p
C2H2 ZF
426
448
YKCDICGKSFAQSGNFNAHKRIH
Ocbimv22028602m.p
C2H2 ZF
454
475
YHCDSCGKPFSKKSYLTTHQHI
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found