CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22033995m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22033995m.g	T141868_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22033995m.p	C2H2 ZF	32	54	YQCDICKKTFQKKRDLTIHKKSH
Ocbimv22033995m.p	C2H2 ZF	88	110	YSCDICGKSFAQSGDLKAHKRTH
Ocbimv22033995m.p	C2H2 ZF	116	138	YRCDICGKSFSQGNQVTMHKRIH
Ocbimv22033995m.p	C2H2 ZF	144	166	FHCDICGKSFIGKHKLKAHKRIH
Ocbimv22033995m.p	C2H2 ZF	172	194	YHCEICGKSFNESSNLAVHKLTH
Ocbimv22033995m.p	C2H2 ZF	200	222	HQCDVCGKSFSRIHHLSVHKHIH
Ocbimv22033995m.p	C2H2 ZF	228	249	YHCDICGKSFSQANTLANHQKK
Ocbimv22033995m.p	C2H2 ZF	255	278	PCHCDVCGKSFFQTCELNHHKITH
Ocbimv22033995m.p	C2H2 ZF	284	306	YLCDTCGKTFPGHYRLIRHKRIH
Ocbimv22033995m.p	C2H2 ZF	312	334	HDCDICGKSFSEIRQLISHKRVH
Ocbimv22033995m.p	C2H2 ZF	340	362	YHCDICGKSFSQKSGLVVHRRIH
Ocbimv22033995m.p	C2H2 ZF	368	390	YRCNVCGKSFSGSGDLTKHKLTH
Ocbimv22033995m.p	C2H2 ZF	396	418	YNCDICSKSFCVRSALTFHKRIH
Ocbimv22033995m.p	C2H2 ZF	424	446	HQCDICGKSFPKKSSLVIHKRIH
Ocbimv22033995m.p	C2H2 ZF	452	474	YHCDICGKPFSQKSSLVIHKRIH
Ocbimv22033995m.p	C2H2 ZF	480	502	YQCDICGKSFSQSHHVIIHKNIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found