CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22034861m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22034861m.g
T141921_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22034861m.p
C2H2 ZF
10
32
YDCGICKKSFSLKQSLTTHKHIH
Ocbimv22034861m.p
C2H2 ZF
38
60
YQCDICGKSFSHNSNLSKHKHIH
Ocbimv22034861m.p
C2H2 ZF
66
88
YQCDICGKSFSQNGHLITHKRIH
Ocbimv22034861m.p
C2H2 ZF
94
116
YQCDICGQSFSRNGQVITHKRVH
Ocbimv22034861m.p
C2H2 ZF
122
144
YHCDVCNKAFTRKDFLIKHKCIH
Ocbimv22034861m.p
C2H2 ZF
150
172
YHCDICDKSFPDKGSLTIHKHVH
Ocbimv22034861m.p
C2H2 ZF
178
200
YQCDICGKSFSQNSELTRHKCIH
Ocbimv22034861m.p
C2H2 ZF
206
228
YHCDICGKSFFLNHSLTSHKQSH
Ocbimv22034861m.p
C2H2 ZF
234
256
YQCDVCGKAFSISTNLIRHKRTH
Ocbimv22034861m.p
C2H2 ZF
262
284
YHCDICGTSFSVSSALTSHKRIH
Ocbimv22034861m.p
C2H2 ZF
290
312
YHCDTCGKSFSVYHGLTYHKRSH
Ocbimv22034861m.p
C2H2 ZF
318
340
YQCNICGKAFCKSSDLIRHRRIH
Ocbimv22034861m.p
C2H2 ZF
346
368
YECVVCGKSFSDCGNLNKHKRIH
Ocbimv22034861m.p
C2H2 ZF
374
396
YVCIVCGKGFLQTGHLTTHVSTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found