CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22035371m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22035371m.g	T141951_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22035371m.p	C2H2 ZF	4	26	YHCDICGKSFSQNGNLVRHSRIH
Ocbimv22035371m.p	C2H2 ZF	32	54	YRCDICGKSFSQNDNLAAHNRIH
Ocbimv22035371m.p	C2H2 ZF	60	82	YRCDICGKSFSKNDGLAKHCRSH
Ocbimv22035371m.p	C2H2 ZF	88	110	YCCDICGKSFSQNGHLAMHSRIH
Ocbimv22035371m.p	C2H2 ZF	116	138	FQCDICGKSFSQNEHLAKHNRIH
Ocbimv22035371m.p	C2H2 ZF	144	166	YCCDICGKSFAHDHGLAKHHHIH
Ocbimv22035371m.p	C2H2 ZF	172	193	FHCDICGKSFSQNDSLTKHIHI
Ocbimv22035371m.p	C2H2 ZF	198	220	HCCDICGKSFSQNHNLTKHIHIH
Ocbimv22035371m.p	C2H2 ZF	226	248	YRCDICGKSFSQNEHLARHNRIH
Ocbimv22035371m.p	C2H2 ZF	254	276	YRCDICGTSFSQKDNLAKHNRIH
Ocbimv22035371m.p	C2H2 ZF	282	304	YRCDICGKSFSHNYHLVMHNRIH
Ocbimv22035371m.p	C2H2 ZF	310	332	YHCDVCGKSFSWNDSLAKHNRIH
Ocbimv22035371m.p	C2H2 ZF	338	360	YCCDICGKSFSQSRQLAVHNRIH
Ocbimv22035371m.p	C2H2 ZF	366	388	YRCDICGKSFSYNDSLAKHCRIH
Ocbimv22035371m.p	C2H2 ZF	394	416	YCCDMCGKSFSRNDQLAVHIRIH
Ocbimv22035371m.p	C2H2 ZF	421	441	PYHCDKSFSYNDSLAKHCRIH
Ocbimv22035371m.p	C2H2 ZF	447	469	YHCDICGKSFSHNNSLSKHCRIH
Ocbimv22035371m.p	C2H2 ZF	475	497	YRCDICGKSFSRNDHLVVHIRIH
Ocbimv22035371m.p	C2H2 ZF	513	535	YHCDICGKSFSQYDCLAKHNHIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found