CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22036717m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22036717m.g
T142017_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22036717m.p
C2H2 ZF
6
27
RCDICGKVFSRRDNLERHKATH
Ocbimv22036717m.p
C2H2 ZF
33
55
FTCEVCSKHFSRKSYLKVHRRIH
Ocbimv22036717m.p
C2H2 ZF
61
83
YKCPTCSYVFSRHDHLATHLSTH
Ocbimv22036717m.p
C2H2 ZF
89
111
YTCDVCCKAFSRRSYLDVHKRIH
Ocbimv22036717m.p
C2H2 ZF
117
139
YKCSTCGYAFSRNDHLVSHLRTH
Ocbimv22036717m.p
C2H2 ZF
145
167
FTCDVCCKAFSRRSYLKVHKRIH
Ocbimv22036717m.p
C2H2 ZF
173
193
FKCTICGYAFARNDHLQNHNK
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found