CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22038220m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22038220m.g
T142086_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22038220m.p
C2H2 ZF
10
32
YECSICKKSLASKGNLTSHIRIH
Ocbimv22038220m.p
C2H2 ZF
38
60
YHCGVCSKTFYRSGELTIHKRVH
Ocbimv22038220m.p
C2H2 ZF
66
88
YQCDICGQSFTRKDILTTHKRIH
Ocbimv22038220m.p
C2H2 ZF
94
116
YQCDMCSKSFSRSTNLTDHKRIH
Ocbimv22038220m.p
C2H2 ZF
122
144
YHCDFCGKSFNQSNQLIKHKRIH
Ocbimv22038220m.p
C2H2 ZF
150
172
YHCDVCDKSFSRNDELTAHKHVH
Ocbimv22038220m.p
C2H2 ZF
178
200
YQCDICGKSFLQNSALTGHKRIH
Ocbimv22038220m.p
C2H2 ZF
206
228
FHCDVCGKAFSQSTAVTIHKLIH
Ocbimv22038220m.p
C2H2 ZF
234
256
YRCDICGKSFIRSKDLKGHKNIH
Ocbimv22038220m.p
C2H2 ZF
262
284
YHCDICGKSFTQSNALTYHKRIH
Ocbimv22038220m.p
C2H2 ZF
290
312
YQCDICGKSFSRNNSLSGHKRIH
Ocbimv22038220m.p
C2H2 ZF
318
340
YHCDICGKSFSQSTAVTVHKRIH
Ocbimv22038220m.p
C2H2 ZF
346
368
YNCDICGKSFSRSNSLTDHKRIH
Ocbimv22038220m.p
C2H2 ZF
374
396
FHCDVCGKSFSRSNSLAEHKRIH
Ocbimv22038220m.p
C2H2 ZF
402
423
FCDICGKSFSQSTAVTVHKRIH
Ocbimv22038220m.p
C2H2 ZF
429
451
YHCEICGKSFSYSKLLTKHKCIH
Ocbimv22038220m.p
C2H2 ZF
457
478
YYCNICAKSFSQPGDLAVHICK
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found