CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22039275m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22039275m.g
T142134_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22039275m.p
C2H2 ZF
1009
1031
WQCCHCPKSYTTKHNLVTHILDH
Ocbimv22039275m.p
C2H2 ZF
1037
1059
HLCMICHKYFKQLSHLNTHMLTH
Ocbimv22039275m.p
C2H2 ZF
1065
1087
HVCQICKKGFTQISHLKRHQAVH
Ocbimv22039275m.p
C2H2 ZF
1093
1115
HLCDKCNRGFAYPSELRVHKEKH
Ocbimv22039275m.p
C2H2 ZF
1120
1142
DKCHDCGEDFSSQRLLRQHQVKH
Ocbimv22039275m.p
C2H2 ZF
1148
1170
LTCKICTKIFRYPSQLKDHMITH
Ocbimv22039275m.p
C2H2 ZF
1176
1198
HICPECGMDFMKEHHLKAHQFTH
Ocbimv22039275m.p
C2H2 ZF
1204
1226
FICPICRRAFNQKANMQRHLLIH
Ocbimv22039275m.p
C2H2 ZF
1232
1254
FRCFTCSKTFTQPQTLKAHMVVH
Ocbimv22039275m.p
C2H2 ZF
1260
1282
YRCNLCSKEFGRLHNLQGHMHMH
Ocbimv22039275m.p
C2H2 ZF
1290
1310
CFCGSSFTLKGNLNRHKKVKH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found