CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30005004m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30005004m.g
T142201_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23916525_peptide
C2H2 ZF
36
57
LCEEYDKCFTVKATLKTHMRVH
23916525_peptide
C2H2 ZF
63
85
YQCKECNKCFTMKGHLKTHMRVH
23916525_peptide
C2H2 ZF
91
113
YQCNECNKRFTMKSSLNRHMRVH
23916525_peptide
C2H2 ZF
121
141
SKDCDKSYKNKCSLKTHSRVH
23916525_peptide
C2H2 ZF
147
169
YQCKICDKIFTVKATLKRHVRVH
23916525_peptide
C2H2 ZF
175
197
YQCKECNKWFTQKGHLKTHMRVH
23916525_peptide
C2H2 ZF
203
225
YQCKECKKRFTWKGNLKTHTSVH
23916525_peptide
C2H2 ZF
231
253
YQCKECNKCFTQKDYLKIHMRVH
23916525_peptide
C2H2 ZF
259
281
YQCKECNKCFTQKGSLKTHMRVH
23916525_peptide
C2H2 ZF
287
309
YQCKECNKCFTRKGHLKTHMRVH
23916525_peptide
C2H2 ZF
315
337
YQCKECNNCFTWESTLKTHTRVH
23916525_peptide
C2H2 ZF
343
365
YRCKQCNKCFTLKSTLKTHMRVH
23916525_peptide
C2H2 ZF
371
393
YECIECNKCFTMKSNLKTHMRVH
23916525_peptide
C2H2 ZF
399
421
YQCKECNKCFTQKDYLKIHMRVH
23916525_peptide
C2H2 ZF
427
449
YQCKECNNCFTWESTLKTHTRVH
23916525_peptide
C2H2 ZF
455
477
YRCKQCNKCFTLKSTLKTHMRVH
23916525_peptide
C2H2 ZF
483
505
YECIECNKCFTYKGTLNTHMRVH
23916525_peptide
C2H2 ZF
511
532
YQCKECNKCFTLKGNLKRHTRK
23916525_peptide
C2H2 ZF
539
561
YKCKQCDKSYETKCSLKKHMEVH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found