CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene20752-v1.0-hybrid
(
Fragaria vesca
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
gene20752-v1.0-hybrid
T196569_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna20752.1-v1.0-hybrid
GATA
129
158
CQNCGDEFSPQQWEGALGPQTLCLSCMVAK
mrna20752.1-v1.0-hybrid
GATA
382
411
CHHCGDEQSPRWLGVPLGPKTLCHACGLAK
mrna20752.1-v1.0-hybrid
GATA
515
545
CMQCGKQTNRWRMGPLGPTTLCNVCGNKYQP
mrna20752.1-v1.0-hybrid
GATA
560
591
CQHCESEEATEWLMCPVGPKALCAACYHWIKY
mrna20752.1-v1.0-hybrid
GATA
614
648
CHNCGAEETPLWRSGPMGSKTLCNACGLRWYKFGD
Links
Other
GATA
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found