CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Q6WL90_TRICY
(
Tripedalia cystophora
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Q6WL90_TRICY
T226942_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q6WL90_TRICY
M02208_2.00
Tripedalia cystophora
NTAATBNN
NNVATTAN
PBM
Weirauch et al.(2014)
pTH5763
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02208_2.00
Homeodomain
1
57
RKNRYNFTPEQTDLLEQLFEKTPYPDATTREEIAKKTNLSEARVQVWFSNRRAKMRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Q6WL90_TRICY
Homeodomain
245
301
RKNRYNFTPEQTDLLEQLFEKTPYPDATTREEIAKKTNLSEARVQVWFSNRRAKMRK
Links
Other
Homeodomain
family TFs
Other
Tripedalia cystophora
TFs
0 Related TFs
">No related TF found