CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_132000044
(
Branchiostoma floridae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh2_pg.scaffold_132000044
T227505_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_132000044
Homeodomain
74
130
RRHRTTFTQEQLAQLEEAFSKSHYPDIYVREELARATKLNEARIQVWFQNCRAKYHR
fgenesh2_pg.scaffold_132000044
Homeodomain
131
149
LFPSLVQVWFQNRRAKYHR
fgenesh2_pg.scaffold_132000044
Homeodomain
155
171
RTLVQVWFQNRRAKYHR
fgenesh2_pg.scaffold_132000044
Homeodomain
177
193
RTLVQVWFQNRRAKYLR
fgenesh2_pg.scaffold_132000044
Homeodomain
199
215
RTLVQMGFQNRRAKYLR
fgenesh2_pg.scaffold_132000044
Homeodomain
221
237
RTLVQVWFQNRRAKYRK
Links
Other
Homeodomain
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found