CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10002556m.g
(
Capsella rubella
)
MADF,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
PF00249 (Myb_DNA-binding)
IPR006578
IPR014778
Carubv10002556m.g
T252666_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10002556m
Myb
14
61
RGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINYL
Carubv10002556m
Myb
67
111
RGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTK
Carubv10002556m
MADF
152
219
NNEGEEMKDQTPKDDVIKETAKALTDNNEELVEKNWKNLRAEEVDLESLFETQGNEISSNSSISSLYS
Links
Other
MADF,Myb/SANT
family TFs
Other
Capsella rubella
TFs
0 Related TFs
">No related TF found