CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

gene07490-v1.0-hybrid *(Fragaria vesca)* mTERF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02536 (mTERF)	IPR003690	gene07490-v1.0-hybrid	T264792_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
mrna07490.1-v1.0-hybrid	mTERF	111	263	VKLLKHYGCSDTLVSKIVRKGPKLLLFNAQKTLLPKLEFFASIGISGTALAGVLSMNPTVLQLSLENTLRPCYRITKTLRIPPEKLPCFFRDFRRIALGKLCIVASNTSILRAHGVPESSFPLWVAFHFNALSFDSEKVKENVKKVRSMGFQP
mrna07490.1-v1.0-hybrid	mTERF	240	385	NALSFDSEKVKENVKKVRSMGFQPLSATFMKALYVISVTDALKWQQKMDLYRKWGLTEDDVLSAFRKYPLFMNFSEKVISSKMDFFVNSMGCQPSYVAACPDVLCYSLEKRIIPRCSVIRLLQVEGLIKEDVSIQNILKCNEDSFF
mrna07490.1-v1.0-hybrid	mTERF	467	586	VKLLKHYGLTDTHISNIVKTLPVLLVYNAEKTLCPKLQFFCSVGLSSNDLARILRFNANILTWSLERSIRPCYDIMKTLGIPKHKVPDFISNYHMFNLKVMSNVAHNTSILRAHQLPESS
mrna07490.1-v1.0-hybrid	mTERF	541	629	IMKTLGIPKHKVPDFISNYHMFNLKVMSNVAHNTSILRAHQLPESSFPLWVSFYFKALSFDSEKVKQNVKKVMSMGFQPSSSTFMKALY
mrna07490.1-v1.0-hybrid	mTERF	594	741	YFKALSFDSEKVKQNVKKVMSMGFQPSSSTFMKALYVISVTDASKWEHKMKFYKMWGWTEDDVLSAFRKTPLFMTFCEKNISAKMDFLLNKWGCQPADLAARPDLLTYSLEKRIIPRCSVVRVLQLKGLVKEDTSMATIVHETEKFFL
mrna07490.1-v1.0-hybrid	mTERF	872	1005	IRLLKHYGFSDTQIPEIVKKQPSLLLCNAEKILAPKLQFLGSIGLSATTIAEVMNYNQRILAQSLERSLKPCYDIIKSVPIPDDMVAVFFKNSRRAMGVKLLSNLPPNISVLREIQVPESAILFCVTYHPLVLA
mrna07490.1-v1.0-hybrid	mTERF	991	1148	SAILFCVTYHPLVLAPNTSKLRESVNKIINIGILPSSFTFMKALQVVSQMDESKWAQKKEFYKKCGWTEEDFLFAFRKNPLFMSLSEKNSSSKMEFLVNEMGWRSADVAEYPDILTHSLEKSIIPRCSVIRVLQYKGLIKKGERSLSTMLINSKKRFH

Links
Other mTERF family TFs
Other *Fragaria vesca* TFs

0 Related TFs

">No related TF found