CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT1G19040
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT1G19040
T292017_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G19040
M07166_2.00
Arabidopsis thaliana
CTTGNNNHNCAAGYWW
WWRCTTGNDNNNCAAG
Dap-seq
OMalley et al.(2016)
AT1G19040_col_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G19040.1
NAC/NAM
6
103
TRGFRFRPADEEVTDYLMRKTQSPEFSCFIKTIDLYDKDPWVLGHVRDPCYNHYEWYYFVKKNPLGNEYLDKPRLNGFEHPRLKWDVLKQIHDALSSG
AT1G19040.1
NAC/NAM
112
168
TYGFRFHPTDQELLSLYLTPKAHSPDFSCFIRERESYMPWSHGFLNMLDLLFTRTVN
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
0 Related TFs
">No related TF found