GT-3A (Arabidopsis thaliana)
Unknown

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
Unknown Unknown AT5G01380 T350210_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GT-3A
M07351_2.00
Arabidopsis thaliana
HWHDWDWNHCACGTGNN

NNCACGTGDNWHWHDWD
Dap-seq
OMalley et al.(2016)
GT3a_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G01380.1 Unknown 1 323

Links

Other Unknown family TFs
Other Arabidopsis thaliana TFs

0 Related TFs

">No related TF found