CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZHD10
(
Arabidopsis thaliana
)
Unknown
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
Unknown
Unknown
AT5G39760
T350212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZHD10
M07353_2.00
Arabidopsis thaliana
NDTAATTARBN
NVYTAATTAHN
Dap-seq
OMalley et al.(2016)
ATHB23_colamp_a
(Direct)
(Direct)
ZHD10
M07354_2.00
Arabidopsis thaliana
WWDNNTAATTARBDDNDWWWWW
WWWWWHNHHVYTAATTANNHWW
Dap-seq
OMalley et al.(2016)
ATHB23_col_b
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G39760.1
Unknown
1
334
MMDMTPTITTTTTPTPKSPEPESETPTRIQPAKPISFSNGIIKRHHHHHHPLLFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDSSQIPPPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPISSSYMLLSLSGTNNNNNNLASFSDLNFSAGNNHHHHHQHTLHGSRKRFRTKFSQFQKEKMHEFAERVGWKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKNTFNRRDIAGNEIRQIDNGGGNHTPILAGEINNHNNGHHGVGGGGELHQSVSSGGGGGGFDSDSGGANGGNVNGSSSS
Links
Other
Unknown
family TFs
Other
Arabidopsis thaliana
TFs
0 Related TFs
">No related TF found