RAP2-13 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G22190 T000412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.867 1.000
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.848 0.960
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.848 0.960
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.721 0.860
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.721 0.860
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.684 0.820
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.684 0.820
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.683 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G22190.1 AP2 81 132

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

457 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_013750 Acremonium chrysogenum ACRE_013750 I 0.000
AGABI2DRAFT_117758 Agaricus bisporus AGABI2DRAFT_117758 N 0.000
BBA_00517 Beauveria bassiana BBA_00517 N 0.000
BBA_01514 Beauveria bassiana BBA_01514 I 0.000
BBA_04784 Beauveria bassiana BBA_04784 N 0.000
CCM_04341 Cordyceps militaris CCM_04341 I 0.000
CFIO01_12268 Colletotrichum fioriniae CFIO01_12268 I 0.000
CGGC5_2102 Colletotrichum gloeosporioides CGGC5_2102 I 0.000
CH063_01368 Colletotrichum higginsianum CH063_01368 N 0.000
CSUB01_08743 Colletotrichum sublineola CSUB01_08743 I 0.000
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 I 0.000
e_gw1.3.1267.1 Cryphonectria parasitica e_gw1.3.1267.1 I 0.000
F503_05646 Ophiostoma piceae uamh F503_05646 N 0.000
F503_05786 Ophiostoma piceae uamh F503_05786 I 0.000
FFUJ_04988 Fusarium fujikuroi FFUJ_04988 I 0.000
FGRRES_06160 Fusarium graminearum FGRRES_06160 I 0.000
FOXG_08550 Fusarium oxysporum FOXG_08550 I 0.000
FPSE_02512 Fusarium pseudograminearum FPSE_02512 I 0.000
GGTG_02947 Gaeumannomyces graminis GGTG_02947 N 0.000
GLRG_02776 Colletotrichum graminicola GLRG_02776 I 0.000
HMPREF1541_05860 Cyphellophora europaea HMPREF1541_05860 N 0.000
HMPREF1541_10222 Cyphellophora europaea HMPREF1541_10222 N 0.000
HMPREF1624_02273 Sporothrix schenckii HMPREF1624_02273 N 0.000
LACBIDRAFT_313811 Laccaria bicolor LACBIDRAFT_313811 N 0.000
MAC_00726 Metarhizium acridum MAC_00726 N 0.000
MAJ_01716 Metarhizium majus MAJ_01716 N 0.000
MAM_03911 Metarhizium album MAM_03911 N 0.000
MANI_020691 Metarhizium anisopliae MANI_020691 N 0.000
MBR_00349 Metarhizium brunneum MBR_00349 N 0.000
MGG_07131 Magnaporthe oryzae MGG_07131 I 0.000
MGU_01192 Metarhizium guizhouense MGU_01192 N 0.000
NechaG103398 Fusarium solani NechaG103398 I 0.000
PFICI_05184 Pestalotiopsis fici PFICI_05184 I 0.000
S40285_00977 Stachybotrys chlorohalonata S40285_00977 I 0.000
S40288_06232 Stachybotrys chartarum S40288_06232 I 0.000
SAPIO_CDS0057 Scedosporium apiospermum SAPIO_CDS0057 N 0.000
SAPIO_CDS7129 Scedosporium apiospermum SAPIO_CDS7129 N 0.000
SCLCIDRAFT_1208573 Scleroderma citrinum SCLCIDRAFT_1208573 N 0.000
TRIATDRAFT_34316 Trichoderma atroviride TRIATDRAFT_34316 I 0.000
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I 0.000
TRIVIDRAFT_28488 Trichoderma virens TRIVIDRAFT_28488 N 0.000
VDAG_08992 Verticillium dahliae VDAG_08992 I 0.000
VHEMI03210 Torrubiella hemipterigena VHEMI03210 N 0.000
X797_005336 Metarhizium robertsii X797_005336 N 0.000
YALI0_B04510g Yarrowia lipolytica YALI0_B04510g N 0.000