Bra004978 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra004978 T001013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.785 0.920
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.785 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004978.1-P AP2 55 106

Links

Other AP2 family TFs
Other Brassica rapa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R012711 Calypte anna Aan_R012711 I 0.000
Afo_R003947 Aptenodytes forsteri Afo_R003947 I 0.000
Alligator_sinensis_CCG019192.1 Alligator sinensis Alligator_sinensis_CCG019192.1 I 0.000
MYNN Anolis carolinensis ENSACAG00000015699 I 0.000
ENSAPLG00000007481 Anas platyrhynchos ENSAPLG00000007481 I 0.000
MYNN Canis familiaris ENSCAFG00000014700 I 0.000
MYNN Callithrix jacchus ENSCJAG00000002629 I 0.000
MYNN Cavia porcellus ENSCPOG00000011640 I 0.000
ENSCSAG00000012570 Chlorocebus sabaeus ENSCSAG00000012570 I 0.000
MYNN Dasypus novemcinctus ENSDNOG00000004681 I 0.000
MYNN Equus caballus ENSECAG00000016427 I 0.000
ENSFALG00000008628 Ficedula albicollis ENSFALG00000008628 I 0.000
MYNN Felis catus ENSFCAG00000000505 I 0.000
MYNN Homo sapiens ENSG00000085274 D 0.000
MYNN Gallus gallus ENSGALG00000009409 I 0.000
MYNN Gorilla gorilla ENSGGOG00000022638 I 0.000
ENSLOCG00000007120 Lepisosteus oculatus ENSLOCG00000007120 I 0.000
MYNN Meleagris gallopavo ENSMGAG00000010294 I 0.000
MYNN Macaca mulatta ENSMMUG00000021875 I 0.000
ENSMMUP00000038685 Macaca fascicularis ENSMMUP00000038685 I 0.000
MYNN Monodelphis domestica ENSMODG00000016120 I 0.000
ENSMPUG00000017089 Mustela putorius furo ENSMPUG00000017089 I 0.000
Mynn Mus musculus ENSMUSG00000037730 I 0.000
ENSNLEG00000005059 Nomascus leucogenys ENSNLEG00000005059 I 0.000
MYNN Ornithorhynchus anatinus ENSOANG00000010325 I 0.000
ENSOARG00000000757 Ovis aries ENSOARG00000000757 I 0.000
MYNN Oryctolagus cuniculus ENSOCUG00000003252 I 0.000
MYNN Otolemur garnettii ENSOGAG00000004734 I 0.000
ENSP00000326240-D1 Bos grunniens ENSP00000326240-D1 I 0.000
ENSPANG00000026081 Papio anubis ENSPANG00000026081 I 0.000
MYNN Procavia capensis ENSPCAG00000015202 I 0.000
ENSPPYG00000014280 Pongo abelii ENSPPYG00000014280 I 0.000
ENSPSIG00000004647 Pelodiscus sinensis ENSPSIG00000004647 I 0.000
MYNN Pan troglodytes ENSPTRG00000015605 I 0.000
Mynn Rattus norvegicus ENSRNOG00000027923 I 0.000
ENSSHAG00000016096 Sarcophilus harrisii ENSSHAG00000016096 I 0.000
MYNN Sus scrofa ENSSSCG00000026829 I 0.000
ENSSTOG00000004642 Ictidomys tridecemlineatus ENSSTOG00000004642 I 0.000
MYNN Tupaia belangeri ENSTBEG00000007630 I 0.000
MYNN Taeniopygia guttata ENSTGUG00000010998 I 0.000
MYNN Vicugna pacos ENSVPAG00000007981 I 0.000
Gfo_R004538 Geospiza fortis Gfo_R004538 I 0.000
Myotis_brandtii_MYNN_10024775 Myotis brandtii Myotis_brandtii_MYNN_10024775 I 0.000
Pvit_09122 Pogona vitticeps Pvit_09122 I 0.000
mynn.L Xenopus laevis XB-GENE-941014 I 0.000
XP_002931590 Xenopus tropicalis XP_002931590 I 0.000