Bra024357 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra024357 T001160_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.747 0.875
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.747 0.875
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.682 0.750
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.682 0.750
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024357.1-P AP2 11 62

Links

Other AP2 family TFs
Other Brassica rapa TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02688 Capronia coronata A1O1_02688 N
A1O3_05266 Capronia epimyces A1O3_05266 N
A1O5_01442 Cladophialophora psammophila A1O5_01442 N
A1O7_08334 Cladophialophora yegresii A1O7_08334 N
ACRE_022770 Acremonium chrysogenum ACRE_022770 N
ARB_01700 Arthroderma benhamiae ARB_01700 N
BAUCODRAFT_72261 Baudoinia compniacensis BAUCODRAFT_72261 N
BBA_02591 Beauveria bassiana BBA_02591 N
Bcin03g01100 Botrytis cinerea Bcin03g01100 N
BDDG_02330 Blastomyces dermatitidis BDDG_02330 N
ACLA_016070 Aspergillus clavatus CADACLAG00000861 N
AFUA_5G13080 Aspergillus fumigatus CADAFUAG00006036 N
CADAORAG00011561 Aspergillus oryzae CADAORAG00011561 N
NFIA_073950 Neosartorya fischeri CADNFIAG00007563 N
CCM_03094 Cordyceps militaris CCM_03094 N
CFIO01_11426 Colletotrichum fioriniae CFIO01_11426 N
CGGC5_6062 Colletotrichum gloeosporioides CGGC5_6062 N
CH063_05999 Colletotrichum higginsianum CH063_05999 N
CHGG_02432 Chaetomium globosum CHGG_02432 N
CIMG_09756 Coccidioides immitis CIMG_09756 N
CMQ_5876 Grosmannia clavigera CMQ_5876 N
Cob_11832 Colletotrichum orbiculare Cob_11832 N
CPC735_023090 Coccidioides posadasii CPC735_023090 N
CPUR_02213 Claviceps purpurea CPUR_02213 N
CSUB01_00157 Colletotrichum sublineola CSUB01_00157 N
CTHT_0029190 Chaetomium thermophilum CTHT_0029190 N
EPUS_05767 Endocarpon pusillum EPUS_05767 N
estExt_Genewise1.C_11835 Neurospora discreta estExt_Genewise1.C_11835 N
EURHEDRAFT_416038 Aspergillus ruber EURHEDRAFT_416038 N
e_gw1.00710.35.1 Aspergillus carbonarius e_gw1.00710.35.1 N
e_gw1.1.3574.1 Cryphonectria parasitica e_gw1.1.3574.1 N
F503_00183 Ophiostoma piceae uamh F503_00183 N
G647_07293 Cladophialophora carrionii G647_07293 N
GGTG_02625 Gaeumannomyces graminis GGTG_02625 N
GLRG_03112 Colletotrichum graminicola GLRG_03112 N
GSTUM_00005836001 Tuber melanosporum GSTUM_00005836001 N
H101_00462 Trichophyton interdigitale H101_00462 N
H102_08872 Trichophyton rubrum H102_08872 N
H105_08898 Trichophyton soudanense H105_08898 N
HMPREF1624_04517 Sporothrix schenckii HMPREF1624_04517 N
M437DRAFT_47906 Aureobasidium melanogenum M437DRAFT_47906 N
MAC_02105 Metarhizium acridum MAC_02105 N
MAJ_05489 Metarhizium majus MAJ_05489 N
MAM_02243 Metarhizium album MAM_02243 N
MANI_002092 Metarhizium anisopliae MANI_002092 N
MBM_07053 Marssonina brunnea MBM_07053 N
MBR_07319 Metarhizium brunneum MBR_07319 N
MGG_07458 Magnaporthe oryzae MGG_07458 N
MGU_05987 Metarhizium guizhouense MGU_05987 N
MPH_00903 Macrophomina phaseolina MPH_00903 N
MYCTH_2301100 Myceliophthora thermophila MYCTH_2301100 N
NCU09529 Neurospora crassa NCU09529 N
NEUTE1DRAFT_75753 Neurospora tetrasperma NEUTE1DRAFT_75753 N
OCS_02045 Ophiocordyceps sinensis OCS_02045 N
PDE_07378 Penicillium oxalicum PDE_07378 N
PODANS_2_8520 Podospora anserina PODANS_2_8520 N
PV04_08874 Capronia semiimmersa PV04_08874 N
PV06_05084 Exophiala oligosperma PV06_05084 N
PV07_00953 Cladophialophora immunda PV07_00953 N
PV08_09110 Exophiala spinifera PV08_09110 N
PV09_02763 Verruconis gallopava PV09_02763 N
PV11_02440 Exophiala sideris PV11_02440 N
PVAR5_1770 Byssochlamys spectabilis PVAR5_1770 N
S40285_01658 Stachybotrys chlorohalonata S40285_01658 N
S40288_00446 Stachybotrys chartarum S40288_00446 N
SBOR_3507 Sclerotinia borealis SBOR_3507 N
SEPMUDRAFT_17793 Sphaerulina musiva SEPMUDRAFT_17793 N
SPBR_05600 Sporothrix brasiliensis SPBR_05600 N
SS1G_00787 Sclerotinia sclerotiorum SS1G_00787 N
TEQG_08764 Trichophyton equinum TEQG_08764 N
TESG_03160 Trichophyton tonsurans TESG_03160 N
THITE_2107310 Thielavia terrestris THITE_2107310 N
TRIATDRAFT_321925 Trichoderma atroviride TRIATDRAFT_321925 N
TRIREDRAFT_3449 Trichoderma reesei TRIREDRAFT_3449 N
TRIVIDRAFT_229241 Trichoderma virens TRIVIDRAFT_229241 N
TRV_03395 Trichophyton verrucosum TRV_03395 N
UREG_04680 Uncinocarpus reesii UREG_04680 N
VHEMI00945 Torrubiella hemipterigena VHEMI00945 N
X797_006673 Metarhizium robertsii X797_006673 N
Z517_05121 Fonsecaea pedrosoi Z517_05121 N
Z518_05219 Rhinocladiella mackenziei Z518_05219 N
Z519_11826 Cladophialophora bantiana Z519_11826 N