fgenesh2_kg.1__3660__AT1G36060.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 fgenesh2_kg.1__3660__AT1G36060.1 T001646_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.864 1.000
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.864 1.000
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.848 0.960
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.711 0.860
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.711 0.860
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.700 0.860
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.700 0.860
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.680 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3660__AT1G36060.1 AP2 139 190

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

460 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007136 Calypte anna Aan_R007136 I
Afo_R002865 Aptenodytes forsteri Afo_R002865 I
Alligator_sinensis_CCG009966.1 Alligator sinensis Alligator_sinensis_CCG009966.1 I
Brh_R001567 Buceros rhinoceros Brh_R001567 I
Cmyd_10017008 Chelonia mydas Cmyd_10017008 I
IKZF5 Anolis carolinensis ENSACAG00000017468 I
ENSAMEG00000004665 Ailuropoda melanoleuca ENSAMEG00000004665 I
ENSAPLG00000015301 Anas platyrhynchos ENSAPLG00000015301 I
IKZF5 Bos taurus ENSBTAG00000023847 I
ENSBTAP00000032681-D1 Bos grunniens ENSBTAP00000032681-D1 I
IKZF5 Canis familiaris ENSCAFG00000030765 I
IKZF5 Callithrix jacchus ENSCJAG00000001109 I
ENSCPOG00000021914 Cavia porcellus ENSCPOG00000021914 I
ENSCPOG00000025133 Cavia porcellus ENSCPOG00000025133 I
ENSCSAG00000004558 Chlorocebus sabaeus ENSCSAG00000004558 I
ikzf5 Danio rerio ENSDARG00000056491 I
IKZF5 Dasypus novemcinctus ENSDNOG00000011974 I
ENSDORG00000011805 Dipodomys ordii ENSDORG00000011805 I
IKZF5 Equus caballus ENSECAG00000006987 I
ENSETEG00000002138 Echinops telfairi ENSETEG00000002138 I
ENSETEG00000004201 Echinops telfairi ENSETEG00000004201 I
ENSETEG00000017021 Echinops telfairi ENSETEG00000017021 I
ENSFALG00000004728 Ficedula albicollis ENSFALG00000004728 I
IKZF5 Felis catus ENSFCAG00000009589 I
IKZF5 Homo sapiens ENSG00000095574 I
ikzf5 Gasterosteus aculeatus ENSGACG00000009720 I
ENSGALG00000026700 Gallus gallus ENSGALG00000026700 I
IKZF5 Gorilla gorilla ENSGGOG00000003823 I
IKZF5 Loxodonta africana ENSLAFG00000012381 I
ENSLOCG00000008225 Lepisosteus oculatus ENSLOCG00000008225 I
IKZF5 Meleagris gallopavo ENSMGAG00000011599 I
ENSMICG00000000457 Microcebus murinus ENSMICG00000000457 I
IKZF5 Myotis lucifugus ENSMLUG00000009538 I
IKZF5 Macaca mulatta ENSMMUG00000023480 I
ENSMODG00000007802 Monodelphis domestica ENSMODG00000007802 I
ENSMPUG00000002786 Mustela putorius furo ENSMPUG00000002786 I
Ikzf5 Mus musculus ENSMUSG00000040167 D
ENSNLEG00000027055 Nomascus leucogenys ENSNLEG00000027055 I
IKZF5 Ornithorhynchus anatinus ENSOANG00000001994 I
ENSOARG00000009064 Ovis aries ENSOARG00000009064 I
IKZF5 Oryctolagus cuniculus ENSOCUG00000013340 I
IKZF5 Otolemur garnettii ENSOGAG00000032070 I
ENSONIG00000016036 Oreochromis niloticus ENSONIG00000016036 I
IKZF5 Ochotona princeps ENSOPRG00000014214 I
ENSP00000357881 Macaca fascicularis ENSP00000357881 I
ENSPANG00000020471 Papio anubis ENSPANG00000020471 I
IKZF5 Procavia capensis ENSPCAG00000012387 I
ENSPPYG00000002727 Pongo abelii ENSPPYG00000002727 I
ENSPSIG00000008029 Pelodiscus sinensis ENSPSIG00000008029 I
IKZF5 Pan troglodytes ENSPTRG00000003019 I
IKZF5 Pteropus vampyrus ENSPVAG00000016435 I
Ikzf5 Rattus norvegicus ENSRNOG00000025651 I
ENSSHAG00000011508 Sarcophilus harrisii ENSSHAG00000011508 I
IKZF5 Sus scrofa ENSSSCG00000023565 I
ENSSTOG00000028669 Ictidomys tridecemlineatus ENSSTOG00000028669 I
IKZF5 Tupaia belangeri ENSTBEG00000004379 I
ENSTGUG00000011361 Taeniopygia guttata ENSTGUG00000011361 I
IKZF5 Takifugu rubripes ENSTRUG00000010762 I
ENSTSYG00000003383 Tarsius syrichta ENSTSYG00000003383 I
ENSXMAG00000016661 Xiphophorus maculatus ENSXMAG00000016661 I
Gfo_R011989 Geospiza fortis Gfo_R011989 I
Myotis_brandtii_IKZF5_10011368 Myotis brandtii Myotis_brandtii_IKZF5_10011368 I
Myotis_brandtii_IKZF5_10011632 Myotis brandtii Myotis_brandtii_IKZF5_10011632 I
Pvit_17596 Pogona vitticeps Pvit_17596 I
Tal_R009868 Tyto alba Tal_R009868 I
ikzf5 Xenopus tropicalis XB-GENE-978531 I
ikzf5.L Xenopus laevis XB-GENE-978537 I