CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G11150
(
Glycine max
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GLYMA12G11150
T001916_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH
DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.718
0.917
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G11150.3
AP2
65
115
CNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAAMAMYG
GLYMA12G11150.4
AP2
65
115
CNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAAMAMYG
Links
Other
AP2
family TFs
Other
Glycine max
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
BRADI2G55780
Brachypodium distachyon
BRADI2G55780
N
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
cassava3989.m1
Manihot esculenta
cassava3989.m1
N
Ca_15160
Cicer arietinum
Ca_15160
N
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
Cla003087
Citrullus lanatus
Cla003087
I
Cla008777
Citrullus lanatus
Cla008777
N
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
F775_19761
Aegilops tauschii
F775_19761
N
GLYMA03G35570
Glycine max
GLYMA03G35570
N
GLYMA12G31150
Glycine max
GLYMA12G31150
N
GLYMA13G39160
Glycine max
GLYMA13G39160
N
GLYMA19G38211
Glycine max
GLYMA19G38211
N
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
Gorai.006G113000
Gossypium raimondii
Gorai.006G113000
N
GRMZM2G439903
Zea mays
GRMZM2G439903
N
GRMZM2G465835
Zea mays
GRMZM2G465835
N
GRMZM5G832473
Zea mays
GRMZM5G832473
N
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
LPERR05G14390
Leersia perrieri
LPERR05G14390
N
LPERR11G02950
Leersia perrieri
LPERR11G02950
N
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
MDP0000130797
Malus domestica
MDP0000130797
N
MDP0000205938
Malus domestica
MDP0000205938
N
MDP0000759504
Malus domestica
MDP0000759504
N
mgf024293m
Mimulus guttatus
mgf024293m
N
MLOC_7757
Hordeum vulgare
MLOC_7757
N
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
MTR_7g105170
Medicago truncatula
MTR_7g105170
N
OB05G26010
Oryza brachyantha
OB05G26010
N
OB11G12830
Oryza brachyantha
OB11G12830
N
OBART01G38190
Oryza barthii
OBART01G38190
N
OBART11G03530
Oryza barthii
OBART11G03530
N
OBART12G03440
Oryza barthii
OBART12G03440
N
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
OGLUM03G09050
Oryza glumaepatula
OGLUM03G09050
N
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
ONIVA06G01110
Oryza nivara
ONIVA06G01110
N
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
OS01G0862800
Oryza sativa
OS01G0862800
N
OS11G0154500
Oryza sativa
OS11G0154500
N
OS12G0156100
Oryza sativa
OS12G0156100
N
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
Pavir.J04751
Panicum virgatum
Pavir.J04751
N
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
Pavir.J36282
Panicum virgatum
Pavir.J36282
N
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
PK27925.1
Cannabis sativa
PK27925.1
N
PK29014.1
Cannabis sativa
PK29014.1
N
Pm001403
Prunus mume
Pm001403
N
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
Sb03g040720
Sorghum bicolor
Sb03g040720
N
Sb05g003400
Sorghum bicolor
Sb05g003400
N
Sb09g021780
Sorghum bicolor
Sb09g021780
N
Si002586m.g
Setaria italica
Si002586m.g
N
Si022966m.g
Setaria italica
Si022966m.g
N
Si025833m.g
Setaria italica
Si025833m.g
N
Si026707m.g
Setaria italica
Si026707m.g
N
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
TCM_041364
Theobroma cacao
TCM_041364
N
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
Traes_1AL_179FC28F2
Triticum aestivum
Traes_1AL_179FC28F2
N
Traes_1AL_C76BCC7EC
Triticum aestivum
Traes_1AL_C76BCC7EC
N
TRIUR3_34272
Triticum urartu
TRIUR3_34272
N