CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava3989.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava3989.m1
T296908_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava3989.m1
NAC/NAM
5
140
APGFRFYPTEEELISFYLHNKLEGKRDDINTAIARVIPALDIYDFNPWDLPQLSGELCRKDPEQWFFFLPRQKREAQGGRPSRLTTTGYWKSTGSPGYVYSSTNNRCIAAKRTMVFYKGRIPHGRKTDWKLNEYRV
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.988
cassava14235.m1
Manihot esculenta
cassava14235.m1
N
0.972
PK29014.1
Cannabis sativa
PK29014.1
N
0.967
PGSC0003DMG400026332
Solanum tuberosum
PGSC0003DMG400026332
N
0.963
Eucgr.A02639
Eucalyptus grandis
Eucgr.A02639
N
0.963
Solyc11g068620.1
Solanum lycopersicum
Solyc11g068620.1
N
0.962
cassava13394.valid.m1
Manihot esculenta
cassava13394.valid.m1
N
0.962
MDP0000205938
Malus domestica
MDP0000205938
N
0.961
PK27925.1
Cannabis sativa
PK27925.1
N
0.961
Eucgr.A02636
Eucalyptus grandis
Eucgr.A02636
N
0.959
POPTR_0009s02430
Populus trichocarpa
POPTR_0009s02430
N
0.957
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.957
Pm001403
Prunus mume
Pm001403
N
0.957
evm.TU.supercontig_195.14
Carica papaya
evm.TU.supercontig_195.14
N
0.957
orange1.1g023996m.g
Citrus sinensis
orange1.1g023996m.g
N
0.957
mgf020234m
Mimulus guttatus
mgf020234m
N
0.955
MDP0000130797
Malus domestica
MDP0000130797
N
0.954
MDP0000759504
Malus domestica
MDP0000759504
N
0.954
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.953
Gorai.001G122800
Gossypium raimondii
Gorai.001G122800
N
0.952
GSMUA_Achr10G04720_001
Musa acuminata
GSMUA_Achr10G04720_001
N
0.951
30055.m001588
Ricinus communis
30055.m001588
N
0.951
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.951
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.950
TCM_041364
Theobroma cacao
TCM_041364
N
0.946
Cla018691
Citrullus lanatus
Cla018691
N
0.946
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.946
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.945
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.945
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.944
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.943
Cla003087
Citrullus lanatus
Cla003087
I
0.941
Cla008777
Citrullus lanatus
Cla008777
N
0.940
GLYMA12G31150
Glycine max
GLYMA12G31150
N
0.939
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.939
GLYMA13G39160
Glycine max
GLYMA13G39160
N
0.938
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.938
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.937
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.936
Eucgr.A02638
Eucalyptus grandis
Eucgr.A02638
N
0.936
Cucsa.083530
Cucumis sativus
Cucsa.083530
N
0.935
Cucsa.185760
Cucumis sativus
Cucsa.185760
N
0.935
MTR_4g052620
Medicago truncatula
MTR_4g052620
N
0.932
gene21734-v1.0-hybrid
Fragaria vesca
gene21734-v1.0-hybrid
N
0.932
MTR_2g086690
Medicago truncatula
MTR_2g086690
N
0.931
Eucgr.J00520
Eucalyptus grandis
Eucgr.J00520
N
0.931
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.930
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.928
GLYMA12G09670
Glycine max
GLYMA12G09670
N
0.926
SapurV1A.3648s0010
Salix purpurea
SapurV1A.3648s0010
N
0.925
LPERR12G03220
Leersia perrieri
LPERR12G03220
N
0.923
Eucgr.A02637
Eucalyptus grandis
Eucgr.A02637
N
0.922
Ca_15160
Cicer arietinum
Ca_15160
N
0.920
POPTR_0016s07690
Populus trichocarpa
POPTR_0016s07690
N
0.919
VIT_06s0080g00780
Vitis vinifera
VIT_06s0080g00780
N
0.919
SapurV1A.0974s0010
Salix purpurea
SapurV1A.0974s0010
N
0.919
GSMUA_Achr9G29750_001
Musa acuminata
GSMUA_Achr9G29750_001
N
0.918
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.918
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.918
SapurV1A.0630s0010
Salix purpurea
SapurV1A.0630s0010
N
0.918
Si026707m.g
Setaria italica
Si026707m.g
N
0.915
Pavir.Ea03745
Panicum virgatum
Pavir.Ea03745
N
0.915
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.915
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.914
ORUFI11G03420
Oryza rufipogon
ORUFI11G03420
N
0.912
OS11G0154500
Oryza sativa
OS11G0154500
N
0.912
Eucgr.J00519
Eucalyptus grandis
Eucgr.J00519
N
0.910
TCM_022676
Theobroma cacao
TCM_022676
N
0.909
BGIOSGA034823
Oryza indica
BGIOSGA034823
N
0.908
GSMUA_Achr8G01410_001
Musa acuminata
GSMUA_Achr8G01410_001
N
0.908
OBART11G03530
Oryza barthii
OBART11G03530
N
0.908
OGLUM11G03170
Oryza glumaepatula
OGLUM11G03170
N
0.908
OMERI11G03230
Oryza meridionalis
OMERI11G03230
N
0.908
ONIVA11G03690
Oryza nivara
ONIVA11G03690
N
0.908
OPUNC11G03220
Oryza punctata
OPUNC11G03220
N
0.908
ORGLA11G0032800
Oryza glaberrima
ORGLA11G0032800
N
0.908
ORGLA12G0180300
Oryza glaberrima
ORGLA12G0180300
N
0.908
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.908
Si002586m.g
Setaria italica
Si002586m.g
N
0.906
evm.TU.supercontig_104.98
Carica papaya
evm.TU.supercontig_104.98
N
0.905
POPTR_0001s22630
Populus trichocarpa
POPTR_0001s22630
N
0.903
OB11G12830
Oryza brachyantha
OB11G12830
N
0.902
Gorai.006G113000
Gossypium raimondii
Gorai.006G113000
N
0.902
mgf024293m
Mimulus guttatus
mgf024293m
N
0.901
OPUNC01G36980
Oryza punctata
OPUNC01G36980
N
0.900
OBART12G03440
Oryza barthii
OBART12G03440
N
0.898
OGLUM12G04110
Oryza glumaepatula
OGLUM12G04110
N
0.898
SapurV1A.0450s0140
Salix purpurea
SapurV1A.0450s0140
N
0.898
SapurV1A.1671s0050
Salix purpurea
SapurV1A.1671s0050
N
0.898
BGIOSGA004848
Oryza indica
BGIOSGA004848
N
0.897
OBART01G38190
Oryza barthii
OBART01G38190
N
0.897
OGLUM01G42380
Oryza glumaepatula
OGLUM01G42380
N
0.897
OMERI01G35090
Oryza meridionalis
OMERI01G35090
N
0.897
ONIVA01G42870
Oryza nivara
ONIVA01G42870
N
0.897
ORGLA01G0320200
Oryza glaberrima
ORGLA01G0320200
N
0.897
ORUFI01G41540
Oryza rufipogon
ORUFI01G41540
N
0.897
OS01G0862800
Oryza sativa
OS01G0862800
N
0.897
Eucgr.C02446
Eucalyptus grandis
Eucgr.C02446
N
0.896
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.896
Eucgr.J00513
Eucalyptus grandis
Eucgr.J00513
N
0.895
LjSGA_014778.2
Lotus japonicus
LjSGA_014778.2
N
0.894
OPUNC12G03240
Oryza punctata
OPUNC12G03240
N
0.893
Eucgr.J00505
Eucalyptus grandis
Eucgr.J00505
N
0.893
Eucgr.J00508
Eucalyptus grandis
Eucgr.J00508
N
0.893
Eucgr.J00512
Eucalyptus grandis
Eucgr.J00512
N
0.893
BGIOSGA037019
Oryza indica
BGIOSGA037019
N
0.892
ONIVA12G03060
Oryza nivara
ONIVA12G03060
N
0.892
ORGLA12G0033100
Oryza glaberrima
ORGLA12G0033100
N
0.892
OS12G0156100
Oryza sativa
OS12G0156100
N
0.892
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.891
LPERR01G32790
Leersia perrieri
LPERR01G32790
N
0.890
Eucgr.I00587
Eucalyptus grandis
Eucgr.I00587
N
0.887
Eucgr.J00511
Eucalyptus grandis
Eucgr.J00511
N
0.886
Lus10004846.g
Linum usitatissimum
Lus10004846.g
N
0.883
Lus10020643.g
Linum usitatissimum
Lus10020643.g
N
0.883
Pavir.J02276
Panicum virgatum
Pavir.J02276
N
0.882
Eucgr.J00514
Eucalyptus grandis
Eucgr.J00514
N
0.881
MDP0000252435
Malus domestica
MDP0000252435
N
0.881
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.879
TRAES3BF019300010CFD_g
Triticum aestivum
TRAES3BF019300010CFD_g
N
0.879