CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G087040
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G087040
T002144_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G087040_P01
AP2
21
72
PQYRGVRRRKWGKWVSEIRQPGTKVRVWLGSFDSAEAAAVAHDVAALCLRGP
Links
Other
AP2
family TFs
Other
Zea mays
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30005.m001245
Ricinus communis
30005.m001245
N
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
Bra011042
Brassica rapa
Bra011042
N
Bra034737
Brassica rapa
Bra034737
N
Carubv10012777m.g
Capsella rubella
Carubv10012777m.g
N
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
e_gw1.141.94.1
Physcomitrella patens
e_gw1.141.94.1
N
F775_00616
Aegilops tauschii
F775_00616
N
F775_22357
Aegilops tauschii
F775_22357
N
GRMZM2G162409
Zea mays
GRMZM2G162409
I
GSMUA_Achr6G20070_001
Musa acuminata
GSMUA_Achr6G20070_001
N
LjSGA_102149.2
Lotus japonicus
LjSGA_102149.2
N
MLOC_63597
Hordeum vulgare
MLOC_63597
I
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
OLONG_004751
Oryza longistaminata
OLONG_004751
N
OMERI02G34900
Oryza meridionalis
OMERI02G34900
N
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
OS08G0346400
Oryza sativa
OS08G0346400
I
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
Pavir.Fa01260
Panicum virgatum
Pavir.Fa01260
N
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
PGSC0003DMG400009304
Solanum tuberosum
PGSC0003DMG400009304
I
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
PRUPE_ppa025217mg
Prunus persica
PRUPE_ppa025217mg
N
scaffold_603773.1
Arabidopsis lyrata
scaffold_603773.1
N