CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI02G34900
(
Oryza meridionalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OMERI02G34900
T276057_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI02G34900.1
Myb
648
676
RMRWTPELHERFVDAVNKLGGSESWSLIL
OMERI02G34900.2
Myb
648
676
RMRWTPELHERFVDAVNKLGGSESWSLIL
OMERI02G34900.3
Myb
648
695
RMRWTPELHERFVDAVNKLGGSEKATPKAVQKIMKVDSLTIYHKYRTV
OMERI02G34900.4
Myb
648
695
RMRWTPELHERFVDAVNKLGGSEKATPKAVQKIMKVDSLTIYHKYRTV
Links
Other
Myb/SANT
family TFs
Other
Oryza meridionalis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
0.909
OBART02G37080
Oryza barthii
OBART02G37080
N
0.880
Sb04g036955
Sorghum bicolor
Sb04g036955
N
0.859
Pavir.Aa00126
Panicum virgatum
Pavir.Aa00126
N
0.859
F775_00616
Aegilops tauschii
F775_00616
N
0.835
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.824
e_gw1.141.94.1
Physcomitrella patens
e_gw1.141.94.1
N
0.809
Bra011042
Brassica rapa
Bra011042
N
0.775
Cla005572
Citrullus lanatus
Cla005572
N
0.775
GSMUA_Achr6G20070_001
Musa acuminata
GSMUA_Achr6G20070_001
N
0.768
OS08G0346400
Oryza sativa
OS08G0346400
I
0.757
PGSC0003DMG400009304
Solanum tuberosum
PGSC0003DMG400009304
I
0.721
PDK_20s1744641g001
Phoenix dactylifera
PDK_20s1744641g001
N
0.720
Gorai.003G021300
Gossypium raimondii
Gorai.003G021300
I
0.718
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
0.693
scaffold_603773.1
Arabidopsis lyrata
scaffold_603773.1
N
0.683
Carubv10012777m.g
Capsella rubella
Carubv10012777m.g
N
0.680
LjSGA_102149.2
Lotus japonicus
LjSGA_102149.2
N
0.680
Bra034737
Brassica rapa
Bra034737
N
0.679
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
0.679
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
0.679
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
0.679
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
0.674
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
0.674
MLOC_63597
Hordeum vulgare
MLOC_63597
I
0.664
30005.m001245
Ricinus communis
30005.m001245
N
0.662
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
0.661
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
0.661
OLONG_004751
Oryza longistaminata
OLONG_004751
N
0.661