CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G434203
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G434203
T002240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF027
M06566_2.00
Arabidopsis thaliana
NNNNNNHNNHNYYRCCGACAN
NTGTCGGYRRNDNNDNNNNNN
Dap-seq
OMalley et al.(2016)
AT1G12630_col_a
0.683
0.875
ERF027
M06567_2.00
Arabidopsis thaliana
NNYYRCCGACANHNNN
NNNDNTGTCGGYRRNN
Dap-seq
OMalley et al.(2016)
AT1G12630_colamp_a
0.683
0.875
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G434203_P01
AP2
91
140
FYRGIRCRSGKWVSEIREPRKARRIWLGTYPMAEMAAAAYDVAARALRGA
Links
Other
AP2
family TFs
Other
Zea mays
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_07823
Cladophialophora psammophila
A1O5_07823
N
A1O7_05848
Cladophialophora yegresii
A1O7_05848
N
A1O9_03901
Exophiala aquamarina
A1O9_03901
N
PV05_04981
Exophiala xenobiotica
PV05_04981
N
PV06_01411
Exophiala oligosperma
PV06_01411
N
PV07_04238
Cladophialophora immunda
PV07_04238
N
PV10_06939
Exophiala mesophila
PV10_06939
N
Z517_04261
Fonsecaea pedrosoi
Z517_04261
N
Z518_08607
Rhinocladiella mackenziei
Z518_08607
N